bug fix, and documentation
This commit is contained in:
parent
99bc98aba5
commit
8a5307c242
|
@ -2,7 +2,7 @@ from ubuntu
|
|||
RUN ["apt-get","update"]
|
||||
RUN ["apt-get","upgrade","-y"]
|
||||
RUN ["apt-get","install","-y","git", "python3-dev","tmux","locales","python3-pip","python3-numpy","python3-pandas","locales"]
|
||||
RUN ["pip3","install","pandas-gbq","tensorflow"]
|
||||
RUN ["pip3","install","pandas-gbq","tensorflow","git+https://hiplab.mc.vanderbilt.edu/git/aou/"]
|
||||
RUN ["mkdir","-p","/usr/apps"]
|
||||
WORKDIR /usr/apps
|
||||
RUN ["git","clone","https://hiplab.mc.vanderbilt.edu/git/aou/gan.git@release","aou-gan"]
|
||||
RUN ["git","clone","https://hiplab.mc.vanderbilt.edu/git/aou/bridge.git@release","aou-gan"]
|
||||
|
|
49
README.md
49
README.md
|
@ -1,2 +1,49 @@
|
|||
# bridge
|
||||
## Introduction
|
||||
---
|
||||
|
||||
This package is designed to generate synthetic data from a dataset from an original dataset using deep learning techniques
|
||||
|
||||
- Generative Adversarial Networks
|
||||
- With "Earth mover's distance"
|
||||
|
||||
## Installation
|
||||
---
|
||||
|
||||
pip install git+https://hiplab.mc.vanderbilt.edu/git/aou/data-maker.git@release
|
||||
|
||||
## Usage
|
||||
---
|
||||
|
||||
After installing the easiest way to get started is as follows (using pandas). The process is as follows:
|
||||
1. Train the GAN on the original/raw dataset
|
||||
|
||||
|
||||
import pandas as pd
|
||||
import data.maker
|
||||
|
||||
df = pd.read_csv('myfile.csv')
|
||||
cols= ['f1','f2','f2']
|
||||
data.maker.train(data=df,cols=cols,logs='logs')
|
||||
|
||||
2. Generate a candidate dataset from the learnt features
|
||||
|
||||
|
||||
import pandas as pd
|
||||
import data.maker
|
||||
|
||||
df = data.maker.generate(logs='logs')
|
||||
df.head()
|
||||
|
||||
|
||||
## Limitations
|
||||
---
|
||||
|
||||
GANS will generate data assuming the original data has all the value space needed:
|
||||
|
||||
- No new data will be created
|
||||
|
||||
Assuming we have a dataset with an gender attribute with values [M,F]. The synthetic data will not be able to generate genders outside [M,F]
|
||||
- Not advised on continuous values
|
||||
|
||||
GANS work well on discrete values and thus are not advised to be used to synthesize things like measurements (height, blood pressure, ...)
|
||||
|
||||
|
|
Loading…
Reference in New Issue