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bug fix: resume function cli

This commit is contained in:
Steve Nyemba 2020-12-11 13:08:54 -06:00
parent 46bc5c2ac9
commit fe6b2ee3e8
2 changed files with 4 additions and 2 deletions
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4
healthcareio/healthcare-io.py
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@ -44,6 +44,7 @@ from multiprocessing import Process
import time import time
from healthcareio import x12 from healthcareio import x12
import smart import smart
from healthcareio.server import proxy
import pandas as pd import pandas as pd
PATH = os.sep.join([os.environ['HOME'],'.healthcareio']) PATH = os.sep.join([os.environ['HOME'],'.healthcareio'])
@ -253,7 +254,8 @@ if __name__ == '__main__' :
# if the user has specified to resume, we should look into the logs and pull the files processed and those that haven't # if the user has specified to resume, we should look into the logs and pull the files processed and those that haven't
# #
if 'resume' in SYS_ARGS : if 'resume' in SYS_ARGS :
files = resume(files,SYS_ARGS['parse'],info) store_config = json.loads( (open(os.sep.join([PATH,'config.json']))).read() )
files = proxy.get.resume(files,store_config )
print (["Found ",len(files)," files unprocessed"]) print (["Found ",len(files)," files unprocessed"])
# #
# @TODO: Log this here so we know what is being processed or not # @TODO: Log this here so we know what is being processed or not

2
setup.py
View File

@ -8,7 +8,7 @@ import sys
def read(fname): def read(fname):
return open(os.path.join(os.path.dirname(__file__), fname)).read() return open(os.path.join(os.path.dirname(__file__), fname)).read()
args = { args = {
"name":"healthcareio","version":"1.4.2", "name":"healthcareio","version":"1.4.4",
"author":"Vanderbilt University Medical Center", "author":"Vanderbilt University Medical Center",
"author_email":"steve.l.nyemba@vumc.org", "author_email":"steve.l.nyemba@vumc.org",
"license":"MIT", "license":"MIT",