32 lines
2.3 KiB
MySQL
32 lines
2.3 KiB
MySQL
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WITH CTE_VOCAB_MAP AS (
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SELECT c.concept_code AS SOURCE_CODE, c.concept_id AS SOURCE_CONCEPT_ID, c.concept_name AS SOURCE_CODE_DESCRIPTION, c.vocabulary_id AS SOURCE_VOCABULARY_ID,
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c.domain_id AS SOURCE_DOMAIN_ID, c.CONCEPT_CLASS_ID AS SOURCE_CONCEPT_CLASS_ID,
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c.VALID_START_DATE AS SOURCE_VALID_START_DATE, c.VALID_END_DATE AS SOURCE_VALID_END_DATE, c.INVALID_REASON AS SOURCE_INVALID_REASON,
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c1.concept_id AS TARGET_CONCEPT_ID, c1.concept_name AS TARGET_CONCEPT_NAME, c1.VOCABULARY_ID AS TARGET_VOCABUALRY_ID, c1.domain_id AS TARGET_DOMAIN_ID, c1.concept_class_id AS TARGET_CONCEPT_CLASS_ID,
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c1.INVALID_REASON AS TARGET_INVALID_REASON, c1.standard_concept AS TARGET_STANDARD_CONCEPT
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FROM CONCEPT C
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JOIN CONCEPT_RELATIONSHIP CR
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ON C.CONCEPT_ID = CR.CONCEPT_ID_1
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AND CR.invalid_reason IS NULL
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AND cr.relationship_id = 'Maps To'
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JOIN CONCEPT C1
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ON CR.CONCEPT_ID_2 = C1.CONCEPT_ID
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AND C1.INVALID_REASON IS NULL
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UNION
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SELECT source_code, SOURCE_CONCEPT_ID, SOURCE_CODE_DESCRIPTION, source_vocabulary_id, c1.domain_id AS SOURCE_DOMAIN_ID, c2.CONCEPT_CLASS_ID AS SOURCE_CONCEPT_CLASS_ID,
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c1.VALID_START_DATE AS SOURCE_VALID_START_DATE, c1.VALID_END_DATE AS SOURCE_VALID_END_DATE,
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stcm.INVALID_REASON AS SOURCE_INVALID_REASON,target_concept_id, c2.CONCEPT_NAME AS TARGET_CONCEPT_NAME, target_vocabulary_id, c2.domain_id AS TARGET_DOMAIN_ID, c2.concept_class_id AS TARGET_CONCEPT_CLASS_ID,
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c2.INVALID_REASON AS TARGET_INVALID_REASON, c2.standard_concept AS TARGET_STANDARD_CONCEPT
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FROM source_to_concept_map stcm
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LEFT OUTER JOIN CONCEPT c1
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ON c1.concept_id = stcm.source_concept_id
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LEFT OUTER JOIN CONCEPT c2
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ON c2.CONCEPT_ID = stcm.target_concept_id
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WHERE stcm.INVALID_REASON IS NULL
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)
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SELECT *
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FROM CTE_VOCAB_MAP
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/*EXAMPLE FILTERS*/
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WHERE SOURCE_VOCABULARY_ID IN ('NDC')
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AND TARGET_VOCABUALRY_ID IN ('RxNORM')
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