2021-08-18 19:30:04 +00:00
|
|
|
--postgresql CDM DDL Specification for OMOP Common Data Model 5.3
|
2021-08-18 17:47:13 +00:00
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.PERSON (
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
gender_concept_id integer NOT NULL,
|
|
|
|
year_of_birth integer NOT NULL,
|
|
|
|
month_of_birth integer NULL,
|
|
|
|
day_of_birth integer NULL,
|
|
|
|
birth_datetime TIMESTAMP NULL,
|
|
|
|
race_concept_id integer NOT NULL,
|
|
|
|
ethnicity_concept_id integer NOT NULL,
|
|
|
|
location_id integer NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
care_site_id integer NULL,
|
|
|
|
person_source_value varchar(50) NULL,
|
|
|
|
gender_source_value varchar(50) NULL,
|
|
|
|
gender_source_concept_id integer NULL,
|
|
|
|
race_source_value varchar(50) NULL,
|
|
|
|
race_source_concept_id integer NULL,
|
|
|
|
ethnicity_source_value varchar(50) NULL,
|
|
|
|
ethnicity_source_concept_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.OBSERVATION_PERIOD (
|
|
|
|
observation_period_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
observation_period_start_date date NOT NULL,
|
|
|
|
observation_period_end_date date NOT NULL,
|
|
|
|
period_type_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.VISIT_OCCURRENCE (
|
|
|
|
visit_occurrence_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
visit_concept_id integer NOT NULL,
|
|
|
|
visit_start_date date NOT NULL,
|
|
|
|
visit_start_datetime TIMESTAMP NULL,
|
|
|
|
visit_end_date date NOT NULL,
|
|
|
|
visit_end_datetime TIMESTAMP NULL,
|
|
|
|
visit_type_concept_id Integer NOT NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
care_site_id integer NULL,
|
|
|
|
visit_source_value varchar(50) NULL,
|
|
|
|
visit_source_concept_id integer NULL,
|
|
|
|
admitting_source_concept_id integer NULL,
|
|
|
|
admitting_source_value varchar(50) NULL,
|
|
|
|
discharge_to_concept_id integer NULL,
|
|
|
|
discharge_to_source_value varchar(50) NULL,
|
|
|
|
preceding_visit_occurrence_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL (
|
|
|
|
visit_detail_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
visit_detail_concept_id integer NOT NULL,
|
|
|
|
visit_detail_start_date date NOT NULL,
|
|
|
|
visit_detail_start_datetime TIMESTAMP NULL,
|
|
|
|
visit_detail_end_date date NOT NULL,
|
|
|
|
visit_detail_end_datetime TIMESTAMP NULL,
|
|
|
|
visit_detail_type_concept_id integer NOT NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
care_site_id integer NULL,
|
|
|
|
visit_detail_source_value varchar(50) NULL,
|
|
|
|
visit_detail_source_concept_id Integer NULL,
|
|
|
|
admitting_source_value Varchar(50) NULL,
|
|
|
|
admitting_source_concept_id Integer NULL,
|
|
|
|
discharge_to_source_value Varchar(50) NULL,
|
|
|
|
discharge_to_concept_id integer NULL,
|
|
|
|
preceding_visit_detail_id integer NULL,
|
|
|
|
visit_detail_parent_id integer NULL,
|
|
|
|
visit_occurrence_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONDITION_OCCURRENCE (
|
|
|
|
condition_occurrence_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
condition_concept_id integer NOT NULL,
|
|
|
|
condition_start_date date NOT NULL,
|
|
|
|
condition_start_datetime TIMESTAMP NULL,
|
|
|
|
condition_end_date date NULL,
|
|
|
|
condition_end_datetime TIMESTAMP NULL,
|
|
|
|
condition_type_concept_id integer NOT NULL,
|
|
|
|
condition_status_concept_id integer NULL,
|
|
|
|
stop_reason varchar(20) NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
condition_source_value varchar(50) NULL,
|
|
|
|
condition_source_concept_id integer NULL,
|
|
|
|
condition_status_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DRUG_EXPOSURE (
|
|
|
|
drug_exposure_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
drug_concept_id integer NOT NULL,
|
|
|
|
drug_exposure_start_date date NOT NULL,
|
|
|
|
drug_exposure_start_datetime TIMESTAMP NULL,
|
|
|
|
drug_exposure_end_date date NOT NULL,
|
|
|
|
drug_exposure_end_datetime TIMESTAMP NULL,
|
|
|
|
verbatim_end_date date NULL,
|
|
|
|
drug_type_concept_id integer NOT NULL,
|
|
|
|
stop_reason varchar(20) NULL,
|
|
|
|
refills integer NULL,
|
|
|
|
quantity NUMERIC NULL,
|
|
|
|
days_supply integer NULL,
|
|
|
|
sig TEXT NULL,
|
|
|
|
route_concept_id integer NULL,
|
|
|
|
lot_number varchar(50) NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
drug_source_value varchar(50) NULL,
|
|
|
|
drug_source_concept_id integer NULL,
|
|
|
|
route_source_value varchar(50) NULL,
|
|
|
|
dose_unit_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
|
|
|
|
procedure_occurrence_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
procedure_concept_id integer NOT NULL,
|
|
|
|
procedure_date date NOT NULL,
|
|
|
|
procedure_datetime TIMESTAMP NULL,
|
|
|
|
procedure_type_concept_id integer NOT NULL,
|
|
|
|
modifier_concept_id integer NULL,
|
|
|
|
quantity integer NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
procedure_source_value varchar(50) NULL,
|
|
|
|
procedure_source_concept_id integer NULL,
|
|
|
|
modifier_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
|
|
|
|
device_exposure_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
device_concept_id integer NOT NULL,
|
|
|
|
device_exposure_start_date date NOT NULL,
|
|
|
|
device_exposure_start_datetime TIMESTAMP NULL,
|
|
|
|
device_exposure_end_date date NULL,
|
|
|
|
device_exposure_end_datetime TIMESTAMP NULL,
|
|
|
|
device_type_concept_id integer NOT NULL,
|
|
|
|
unique_device_id varchar(50) NULL,
|
|
|
|
quantity integer NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
device_source_value varchar(50) NULL,
|
|
|
|
device_source_concept_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.MEASUREMENT (
|
|
|
|
measurement_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
measurement_concept_id integer NOT NULL,
|
|
|
|
measurement_date date NOT NULL,
|
|
|
|
measurement_datetime TIMESTAMP NULL,
|
|
|
|
measurement_time varchar(10) NULL,
|
|
|
|
measurement_type_concept_id integer NOT NULL,
|
|
|
|
operator_concept_id integer NULL,
|
|
|
|
value_as_number NUMERIC NULL,
|
|
|
|
value_as_concept_id integer NULL,
|
|
|
|
unit_concept_id integer NULL,
|
|
|
|
range_low NUMERIC NULL,
|
|
|
|
range_high NUMERIC NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
measurement_source_value varchar(50) NULL,
|
|
|
|
measurement_source_concept_id integer NULL,
|
|
|
|
unit_source_value varchar(50) NULL,
|
|
|
|
value_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.OBSERVATION (
|
|
|
|
observation_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
observation_concept_id integer NOT NULL,
|
|
|
|
observation_date date NOT NULL,
|
|
|
|
observation_datetime TIMESTAMP NULL,
|
|
|
|
observation_type_concept_id integer NOT NULL,
|
|
|
|
value_as_number NUMERIC NULL,
|
|
|
|
value_as_string varchar(60) NULL,
|
|
|
|
value_as_concept_id Integer NULL,
|
|
|
|
qualifier_concept_id integer NULL,
|
|
|
|
unit_concept_id integer NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
observation_source_value varchar(50) NULL,
|
|
|
|
observation_source_concept_id integer NULL,
|
|
|
|
unit_source_value varchar(50) NULL,
|
|
|
|
qualifier_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DEATH (
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
death_date date NOT NULL,
|
|
|
|
death_datetime TIMESTAMP NULL,
|
|
|
|
death_type_concept_id integer NULL,
|
|
|
|
cause_concept_id integer NULL,
|
|
|
|
cause_source_value varchar(50) NULL,
|
|
|
|
cause_source_concept_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.NOTE (
|
|
|
|
note_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
note_date date NOT NULL,
|
|
|
|
note_datetime TIMESTAMP NULL,
|
|
|
|
note_type_concept_id integer NOT NULL,
|
|
|
|
note_class_concept_id integer NOT NULL,
|
|
|
|
note_title varchar(250) NULL,
|
|
|
|
note_text TEXT NOT NULL,
|
|
|
|
encoding_concept_id integer NOT NULL,
|
|
|
|
language_concept_id integer NOT NULL,
|
|
|
|
provider_id integer NULL,
|
|
|
|
visit_occurrence_id integer NULL,
|
|
|
|
visit_detail_id integer NULL,
|
|
|
|
note_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
|
|
|
|
note_nlp_id integer NOT NULL,
|
|
|
|
note_id integer NOT NULL,
|
|
|
|
section_concept_id integer NULL,
|
|
|
|
snippet varchar(250) NULL,
|
|
|
|
"offset" varchar(50) NULL,
|
|
|
|
lexical_variant varchar(250) NOT NULL,
|
|
|
|
note_nlp_concept_id integer NULL,
|
|
|
|
note_nlp_source_concept_id integer NULL,
|
|
|
|
nlp_system varchar(250) NULL,
|
|
|
|
nlp_date date NOT NULL,
|
|
|
|
nlp_datetime TIMESTAMP NULL,
|
|
|
|
term_exists varchar(1) NULL,
|
|
|
|
term_temporal varchar(50) NULL,
|
|
|
|
term_modifiers varchar(2000) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.SPECIMEN (
|
|
|
|
specimen_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
specimen_concept_id integer NOT NULL,
|
|
|
|
specimen_type_concept_id integer NOT NULL,
|
|
|
|
specimen_date date NOT NULL,
|
|
|
|
specimen_datetime TIMESTAMP NULL,
|
|
|
|
quantity NUMERIC NULL,
|
|
|
|
unit_concept_id integer NULL,
|
|
|
|
anatomic_site_concept_id integer NULL,
|
|
|
|
disease_status_concept_id integer NULL,
|
|
|
|
specimen_source_id varchar(50) NULL,
|
|
|
|
specimen_source_value varchar(50) NULL,
|
|
|
|
unit_source_value varchar(50) NULL,
|
|
|
|
anatomic_site_source_value varchar(50) NULL,
|
|
|
|
disease_status_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP (
|
|
|
|
domain_concept_id_1 integer NOT NULL,
|
|
|
|
fact_id_1 integer NOT NULL,
|
|
|
|
domain_concept_id_2 integer NOT NULL,
|
|
|
|
fact_id_2 integer NOT NULL,
|
|
|
|
relationship_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.LOCATION (
|
|
|
|
location_id integer NOT NULL,
|
|
|
|
address_1 varchar(50) NULL,
|
|
|
|
address_2 varchar(50) NULL,
|
|
|
|
city varchar(50) NULL,
|
|
|
|
state varchar(2) NULL,
|
|
|
|
zip varchar(9) NULL,
|
|
|
|
county varchar(20) NULL,
|
|
|
|
location_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CARE_SITE (
|
|
|
|
care_site_id integer NOT NULL,
|
|
|
|
care_site_name varchar(255) NULL,
|
|
|
|
place_of_service_concept_id integer NULL,
|
|
|
|
location_id integer NULL,
|
|
|
|
care_site_source_value varchar(50) NULL,
|
|
|
|
place_of_service_source_value varchar(50) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.PROVIDER (
|
|
|
|
provider_id integer NOT NULL,
|
|
|
|
provider_name varchar(255) NULL,
|
|
|
|
npi varchar(20) NULL,
|
|
|
|
dea varchar(20) NULL,
|
|
|
|
specialty_concept_id integer NULL,
|
|
|
|
care_site_id integer NULL,
|
|
|
|
year_of_birth integer NULL,
|
|
|
|
gender_concept_id integer NULL,
|
|
|
|
provider_source_value varchar(50) NULL,
|
|
|
|
specialty_source_value varchar(50) NULL,
|
|
|
|
specialty_source_concept_id integer NULL,
|
|
|
|
gender_source_value varchar(50) NULL,
|
|
|
|
gender_source_concept_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.PAYER_PLAN_PERIOD (
|
|
|
|
payer_plan_period_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
payer_plan_period_start_date date NOT NULL,
|
|
|
|
payer_plan_period_end_date date NOT NULL,
|
|
|
|
payer_concept_id integer NULL,
|
|
|
|
payer_source_value varchar(50) NULL,
|
|
|
|
payer_source_concept_id integer NULL,
|
|
|
|
plan_concept_id integer NULL,
|
|
|
|
plan_source_value varchar(50) NULL,
|
|
|
|
plan_source_concept_id integer NULL,
|
|
|
|
sponsor_concept_id integer NULL,
|
|
|
|
sponsor_source_value varchar(50) NULL,
|
|
|
|
sponsor_source_concept_id integer NULL,
|
|
|
|
family_source_value varchar(50) NULL,
|
|
|
|
stop_reason_concept_id integer NULL,
|
|
|
|
stop_reason_source_value varchar(50) NULL,
|
|
|
|
stop_reason_source_concept_id integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.COST (
|
|
|
|
cost_id integer NOT NULL,
|
|
|
|
cost_event_id integer NOT NULL,
|
|
|
|
cost_domain_id varchar(20) NOT NULL,
|
|
|
|
cost_type_concept_id integer NOT NULL,
|
|
|
|
currency_concept_id integer NULL,
|
|
|
|
total_charge NUMERIC NULL,
|
|
|
|
total_cost NUMERIC NULL,
|
|
|
|
total_paid NUMERIC NULL,
|
|
|
|
paid_by_payer NUMERIC NULL,
|
|
|
|
paid_by_patient NUMERIC NULL,
|
|
|
|
paid_patient_copay NUMERIC NULL,
|
|
|
|
paid_patient_coinsurance NUMERIC NULL,
|
|
|
|
paid_patient_deductible NUMERIC NULL,
|
|
|
|
paid_by_primary NUMERIC NULL,
|
|
|
|
paid_ingredient_cost NUMERIC NULL,
|
|
|
|
paid_dispensing_fee NUMERIC NULL,
|
|
|
|
payer_plan_period_id integer NULL,
|
|
|
|
amount_allowed NUMERIC NULL,
|
|
|
|
revenue_code_concept_id integer NULL,
|
|
|
|
revenue_code_source_value varchar(50) NULL,
|
|
|
|
drg_concept_id integer NULL,
|
|
|
|
drg_source_value varchar(3) NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DRUG_ERA (
|
|
|
|
drug_era_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
drug_concept_id integer NOT NULL,
|
2022-01-13 18:59:03 +00:00
|
|
|
drug_era_start_date date NOT NULL,
|
|
|
|
drug_era_end_date date NOT NULL,
|
2021-08-18 17:47:13 +00:00
|
|
|
drug_exposure_count integer NULL,
|
|
|
|
gap_days integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DOSE_ERA (
|
|
|
|
dose_era_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
drug_concept_id integer NOT NULL,
|
|
|
|
unit_concept_id integer NOT NULL,
|
|
|
|
dose_value NUMERIC NOT NULL,
|
2022-01-13 18:59:03 +00:00
|
|
|
dose_era_start_date date NOT NULL,
|
|
|
|
dose_era_end_date date NOT NULL );
|
2021-08-18 17:47:13 +00:00
|
|
|
--HINT DISTRIBUTE ON KEY (person_id)
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
|
|
|
|
condition_era_id integer NOT NULL,
|
|
|
|
person_id integer NOT NULL,
|
|
|
|
condition_concept_id integer NOT NULL,
|
2022-01-13 18:59:03 +00:00
|
|
|
condition_era_start_date date NOT NULL,
|
|
|
|
condition_era_end_date date NOT NULL,
|
2021-08-18 17:47:13 +00:00
|
|
|
condition_occurrence_count integer NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.METADATA (
|
|
|
|
metadata_concept_id integer NOT NULL,
|
|
|
|
metadata_type_concept_id integer NOT NULL,
|
|
|
|
name varchar(250) NOT NULL,
|
|
|
|
value_as_string varchar(250) NULL,
|
|
|
|
value_as_concept_id integer NULL,
|
|
|
|
metadata_date date NULL,
|
|
|
|
metadata_datetime TIMESTAMP NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CDM_SOURCE (
|
|
|
|
cdm_source_name varchar(255) NOT NULL,
|
|
|
|
cdm_source_abbreviation varchar(25) NULL,
|
|
|
|
cdm_holder varchar(255) NULL,
|
|
|
|
source_description TEXT NULL,
|
|
|
|
source_documentation_reference varchar(255) NULL,
|
|
|
|
cdm_etl_reference varchar(255) NULL,
|
|
|
|
source_release_date date NULL,
|
|
|
|
cdm_release_date date NULL,
|
|
|
|
cdm_version varchar(10) NULL,
|
|
|
|
vocabulary_version varchar(20) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONCEPT (
|
|
|
|
concept_id integer NOT NULL,
|
|
|
|
concept_name varchar(255) NOT NULL,
|
|
|
|
domain_id varchar(20) NOT NULL,
|
|
|
|
vocabulary_id varchar(20) NOT NULL,
|
|
|
|
concept_class_id varchar(20) NOT NULL,
|
|
|
|
standard_concept varchar(1) NULL,
|
|
|
|
concept_code varchar(50) NOT NULL,
|
|
|
|
valid_start_date date NOT NULL,
|
|
|
|
valid_end_date date NOT NULL,
|
|
|
|
invalid_reason varchar(1) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.VOCABULARY (
|
|
|
|
vocabulary_id varchar(20) NOT NULL,
|
|
|
|
vocabulary_name varchar(255) NOT NULL,
|
|
|
|
vocabulary_reference varchar(255) NOT NULL,
|
|
|
|
vocabulary_version varchar(255) NULL,
|
|
|
|
vocabulary_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DOMAIN (
|
|
|
|
domain_id varchar(20) NOT NULL,
|
|
|
|
domain_name varchar(255) NOT NULL,
|
|
|
|
domain_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONCEPT_CLASS (
|
|
|
|
concept_class_id varchar(20) NOT NULL,
|
|
|
|
concept_class_name varchar(255) NOT NULL,
|
|
|
|
concept_class_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONCEPT_RELATIONSHIP (
|
|
|
|
concept_id_1 integer NOT NULL,
|
|
|
|
concept_id_2 integer NOT NULL,
|
|
|
|
relationship_id varchar(20) NOT NULL,
|
|
|
|
valid_start_date date NOT NULL,
|
|
|
|
valid_end_date date NOT NULL,
|
|
|
|
invalid_reason varchar(1) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.RELATIONSHIP (
|
|
|
|
relationship_id varchar(20) NOT NULL,
|
|
|
|
relationship_name varchar(255) NOT NULL,
|
|
|
|
is_hierarchical varchar(1) NOT NULL,
|
|
|
|
defines_ancestry varchar(1) NOT NULL,
|
|
|
|
reverse_relationship_id varchar(20) NOT NULL,
|
|
|
|
relationship_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONCEPT_SYNONYM (
|
|
|
|
concept_id integer NOT NULL,
|
|
|
|
concept_synonym_name varchar(1000) NOT NULL,
|
|
|
|
language_concept_id integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.CONCEPT_ANCESTOR (
|
|
|
|
ancestor_concept_id integer NOT NULL,
|
|
|
|
descendant_concept_id integer NOT NULL,
|
|
|
|
min_levels_of_separation integer NOT NULL,
|
|
|
|
max_levels_of_separation integer NOT NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.SOURCE_TO_CONCEPT_MAP (
|
|
|
|
source_code varchar(50) NOT NULL,
|
|
|
|
source_concept_id integer NOT NULL,
|
|
|
|
source_vocabulary_id varchar(20) NOT NULL,
|
|
|
|
source_code_description varchar(255) NULL,
|
|
|
|
target_concept_id integer NOT NULL,
|
|
|
|
target_vocabulary_id varchar(20) NOT NULL,
|
|
|
|
valid_start_date date NOT NULL,
|
|
|
|
valid_end_date date NOT NULL,
|
|
|
|
invalid_reason varchar(1) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.DRUG_STRENGTH (
|
|
|
|
drug_concept_id integer NOT NULL,
|
|
|
|
ingredient_concept_id integer NOT NULL,
|
|
|
|
amount_value NUMERIC NULL,
|
|
|
|
amount_unit_concept_id integer NULL,
|
|
|
|
numerator_value NUMERIC NULL,
|
|
|
|
numerator_unit_concept_id integer NULL,
|
|
|
|
denominator_value NUMERIC NULL,
|
|
|
|
denominator_unit_concept_id integer NULL,
|
|
|
|
box_size integer NULL,
|
|
|
|
valid_start_date date NOT NULL,
|
|
|
|
valid_end_date date NOT NULL,
|
|
|
|
invalid_reason varchar(1) NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.COHORT_DEFINITION (
|
|
|
|
cohort_definition_id integer NOT NULL,
|
|
|
|
cohort_definition_name varchar(255) NOT NULL,
|
|
|
|
cohort_definition_description TEXT NULL,
|
|
|
|
definition_type_concept_id integer NOT NULL,
|
|
|
|
cohort_definition_syntax TEXT NULL,
|
|
|
|
subject_concept_id integer NOT NULL,
|
|
|
|
cohort_initiation_date date NULL );
|
|
|
|
--HINT DISTRIBUTE ON RANDOM
|
|
|
|
CREATE TABLE @cdmDatabaseSchema.ATTRIBUTE_DEFINITION (
|
|
|
|
attribute_definition_id integer NOT NULL,
|
|
|
|
attribute_name varchar(255) NOT NULL,
|
|
|
|
attribute_description TEXT NULL,
|
|
|
|
attribute_type_concept_id integer NOT NULL,
|
|
|
|
attribute_syntax TEXT NULL );
|