removed spaces in file and folder names. Regenerated ddl output. Tried to fix Field_Level.csv file.

This commit is contained in:
Adam Black 2021-08-18 23:28:57 -04:00
parent 887e882572
commit 867e9bb559
12 changed files with 4 additions and 20 deletions

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@ -514,20 +514,4 @@ ATTRIBUTE_DEFINITION,attribute_name,Yes,varchar(255),,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_description,No,varchar(MAX),,,No,No,,,,, ATTRIBUTE_DEFINITION,attribute_description,No,varchar(MAX),,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_type_concept_id,Yes,integer,,,No,Yes,CONCEPT,CONCEPT_ID,,, ATTRIBUTE_DEFINITION,attribute_type_concept_id,Yes,integer,,,No,Yes,CONCEPT,CONCEPT_ID,,,
ATTRIBUTE_DEFINITION,attribute_syntax,No,varchar(MAX),,,No,No,,,,, ATTRIBUTE_DEFINITION,attribute_syntax,No,varchar(MAX),,,No,No,,,,,
=======
1-Jan-1970.",,No,No,,,,,
DRUG_STRENGTH,valid_end_date,Yes,date,The date when then Concept became invalid.,,No,No,,,,,
DRUG_STRENGTH,invalid_reason,No,varchar(1),"Reason the concept was invalidated. Possible values are D (deleted), U (replaced with an update) or NULL when valid_end_date has the default value.",,No,No,,,,,
COHORT_DEFINITION,cohort_definition_id,Yes,integer,"This is the identifier given to the cohort, usually by the ATLAS application",,No,No,,,,,
COHORT_DEFINITION,cohort_definition_name,Yes,varchar(255),A short description of the cohort,,No,No,,,,,
COHORT_DEFINITION,cohort_definition_description,No,varchar(MAX),A complete description of the cohort.,,No,No,,,,,
COHORT_DEFINITION,definition_type_concept_id,Yes,integer,Type defining what kind of Cohort Definition the record represents and how the syntax may be executed.,,No,Yes,CONCEPT,CONCEPT_ID,,,
COHORT_DEFINITION,cohort_definition_syntax,No,varchar(MAX),Syntax or code to operationalize the Cohort Definition.,,No,No,,,,,
COHORT_DEFINITION,subject_concept_id,Yes,integer,"This field contains a Concept that represents the domain of the subjects that are members of the cohort (e.g., Person, Provider, Visit).",,No,Yes,CONCEPT,CONCEPT_ID,,,
COHORT_DEFINITION,cohort_initiation_date,No,date,A date to indicate when the Cohort was initiated in the COHORT table.,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_definition_id,Yes,integer,,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_name,Yes,varchar(255),,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_description,No,varchar(MAX),,,No,No,,,,,
ATTRIBUTE_DEFINITION,attribute_type_concept_id,Yes,integer,,,No,Yes,CONCEPT,CONCEPT_ID,,,
ATTRIBUTE_DEFINITION,attribute_syntax,No,varchar(MAX),,,No,No,,,,,
>>>>>>> v5.4:inst/csv/OMOP_CDMv5.3.1_Field_Level.csv

Can't render this file because it has a wrong number of fields in line 517.

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@ -1,4 +1,4 @@
/*@targetdialect OMOP CDM Indices /*@targetDialect OMOP CDM Indices
There are no unique indices created because it is assumed that the primary key constraints have been run prior to There are no unique indices created because it is assumed that the primary key constraints have been run prior to
implementing indices. implementing indices.

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@ -1,4 +1,4 @@
/*@targetdialect OMOP CDM Indices /*@targetDialect OMOP CDM Indices
There are no unique indices created because it is assumed that the primary key constraints have been run prior to There are no unique indices created because it is assumed that the primary key constraints have been run prior to
implementing indices. implementing indices.

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@ -1,4 +1,4 @@
/*@targetdialect OMOP CDM Indices*/ /*@targetDialect OMOP CDM Indices*/
/************************ /************************