Regenerate DDLs for CDM 5.4

.gitignore

@@ -14,3 +14,4 @@ extras/CodeToRun.R
 ehthumbs.db
 Thumbs.db
 extras/codeToRun.R
+output/

R/buildRelease.R

@@ -73,7 +73,7 @@ buildRelease <- function(cdmVersions = listSupportedVersions(),
 #'
 buildReleaseZip <- function(cdmVersion,
                             targetDialect = listSupportedDialects(),
-                            outputfolder = file.path(getwd(), "inst", "ddl")){
+                            outputfolder = file.path(getwd(), "output")){
   # argument checks
   stopifnot(is.character(cdmVersion), length(cdmVersion) == 1, cdmVersion %in% listSupportedVersions())
 

inst/ddl/5.4/bigquery/OMOPCDM_bigquery_5.4_constraints.sql

@@ -102,6 +102,14 @@ alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure
 
 alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure_occurrence_modifier_concept_id foreign key (modifier_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure_occurrence_provider_id foreign key (provider_id) references @cdmDatabaseSchema.provider (provider_id);
+
+alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure_occurrence_visit_occurrence_id foreign key (visit_occurrence_id) references @cdmDatabaseSchema.visit_occurrence (visit_occurrence_id);
+
+alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure_occurrence_visit_detail_id foreign key (visit_detail_id) references @cdmDatabaseSchema.visit_detail (visit_detail_id);
+
+alter table @cdmDatabaseSchema.procedure_occurrence add constraint fpk_procedure_occurrence_procedure_source_concept_id foreign key (procedure_source_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
 alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposure_person_id foreign key (person_id) references @cdmDatabaseSchema.person (person_id);
 
 alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposure_device_concept_id foreign key (device_concept_id) references @cdmDatabaseSchema.concept (concept_id);
@@ -116,6 +124,10 @@ alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposur
 
 alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposure_device_source_concept_id foreign key (device_source_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposure_unit_concept_id foreign key (unit_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
+alter table @cdmDatabaseSchema.device_exposure add constraint fpk_device_exposure_unit_source_concept_id foreign key (unit_source_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
 alter table @cdmDatabaseSchema.measurement add constraint fpk_measurement_person_id foreign key (person_id) references @cdmDatabaseSchema.person (person_id);
 
 alter table @cdmDatabaseSchema.measurement add constraint fpk_measurement_measurement_concept_id foreign key (measurement_concept_id) references @cdmDatabaseSchema.concept (concept_id);
@@ -172,8 +184,6 @@ alter table @cdmDatabaseSchema.death add constraint fpk_death_cause_source_conce
 
 alter table @cdmDatabaseSchema.note add constraint fpk_note_person_id foreign key (person_id) references @cdmDatabaseSchema.person (person_id);
 
-alter table @cdmDatabaseSchema.note add constraint fpk_note_note_event_field_concept_id foreign key (note_event_field_concept_id) references @cdmDatabaseSchema.concept (concept_id);
-
 alter table @cdmDatabaseSchema.note add constraint fpk_note_note_type_concept_id foreign key (note_type_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
 alter table @cdmDatabaseSchema.note add constraint fpk_note_note_class_concept_id foreign key (note_class_concept_id) references @cdmDatabaseSchema.concept (concept_id);
@@ -188,6 +198,8 @@ alter table @cdmDatabaseSchema.note add constraint fpk_note_visit_occurrence_id
 
 alter table @cdmDatabaseSchema.note add constraint fpk_note_visit_detail_id foreign key (visit_detail_id) references @cdmDatabaseSchema.visit_detail (visit_detail_id);
 
+alter table @cdmDatabaseSchema.note add constraint fpk_note_note_event_field_concept_id foreign key (note_event_field_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
 alter table @cdmDatabaseSchema.note_nlp add constraint fpk_note_nlp_section_concept_id foreign key (section_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
 alter table @cdmDatabaseSchema.note_nlp add constraint fpk_note_nlp_note_nlp_concept_id foreign key (note_nlp_concept_id) references @cdmDatabaseSchema.concept (concept_id);
@@ -212,6 +224,8 @@ alter table @cdmDatabaseSchema.fact_relationship add constraint fpk_fact_relatio
 
 alter table @cdmDatabaseSchema.fact_relationship add constraint fpk_fact_relationship_relationship_concept_id foreign key (relationship_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.location add constraint fpk_location_country_concept_id foreign key (country_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
 alter table @cdmDatabaseSchema.care_site add constraint fpk_care_site_place_of_service_concept_id foreign key (place_of_service_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
 alter table @cdmDatabaseSchema.care_site add constraint fpk_care_site_location_id foreign key (location_id) references @cdmDatabaseSchema.location (location_id);
@@ -266,6 +280,8 @@ alter table @cdmDatabaseSchema.dose_era add constraint fpk_dose_era_drug_concept
 
 alter table @cdmDatabaseSchema.dose_era add constraint fpk_dose_era_unit_concept_id foreign key (unit_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.condition_era add constraint fpk_condition_era_person_id foreign key (person_id) references @cdmDatabaseSchema.person (person_id);
+
 alter table @cdmDatabaseSchema.condition_era add constraint fpk_condition_era_condition_concept_id foreign key (condition_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
 alter table @cdmDatabaseSchema.episode add constraint fpk_episode_person_id foreign key (person_id) references @cdmDatabaseSchema.person (person_id);
@@ -288,6 +304,8 @@ alter table @cdmDatabaseSchema.metadata add constraint fpk_metadata_metadata_typ
 
 alter table @cdmDatabaseSchema.metadata add constraint fpk_metadata_value_as_concept_id foreign key (value_as_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.cdm_source add constraint fpk_cdm_source_cdm_version_concept_id foreign key (cdm_version_concept_id) references @cdmDatabaseSchema.concept (concept_id);
+
 alter table @cdmDatabaseSchema.concept add constraint fpk_concept_domain_id foreign key (domain_id) references @cdmDatabaseSchema.domain (domain_id);
 
 alter table @cdmDatabaseSchema.concept add constraint fpk_concept_vocabulary_id foreign key (vocabulary_id) references @cdmDatabaseSchema.vocabulary (vocabulary_id);
@@ -332,6 +350,8 @@ alter table @cdmDatabaseSchema.drug_strength add constraint fpk_drug_strength_nu
 
 alter table @cdmDatabaseSchema.drug_strength add constraint fpk_drug_strength_denominator_unit_concept_id foreign key (denominator_unit_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
+alter table @cdmDatabaseSchema.cohort_definition add constraint fpk_cohort_definition_cohort_definition_id foreign key (cohort_definition_id) references @cdmDatabaseSchema.cohort (cohort_definition_id);
+
 alter table @cdmDatabaseSchema.cohort_definition add constraint fpk_cohort_definition_definition_type_concept_id foreign key (definition_type_concept_id) references @cdmDatabaseSchema.concept (concept_id);
 
 alter table @cdmDatabaseSchema.cohort_definition add constraint fpk_cohort_definition_subject_concept_id foreign key (subject_concept_id) references @cdmDatabaseSchema.concept (concept_id);

inst/ddl/5.4/bigquery/OMOPCDM_bigquery_5.4_ddl.sql

@@ -123,6 +123,8 @@ create table @cdmDatabaseSchema.procedure_occurrence (
 			procedure_concept_id INT64 not null,
 			procedure_date date not null,
 			procedure_datetime datetime null,
+			procedure_end_date date null,
+			procedure_end_datetime datetime null,
 			procedure_type_concept_id INT64 not null,
 			modifier_concept_id INT64,
 			quantity INT64,
@@ -131,9 +133,7 @@ create table @cdmDatabaseSchema.procedure_occurrence (
 			visit_detail_id INT64,
 			procedure_source_value STRING,
 			procedure_source_concept_id INT64,
-			modifier_source_value STRING,
+			modifier_source_value STRING );
-			procedure_status_source_value STRING,
-			procedure_status_concept_id INT64 not null );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 create table @cdmDatabaseSchema.device_exposure (
@@ -221,8 +221,6 @@ create table @cdmDatabaseSchema.death (
 create table @cdmDatabaseSchema.note (
 			note_id INT64 not null,
 			person_id INT64 not null,
-			note_event_id INT64,
-			note_event_field_concept_id INT64,
 			note_date date not null,
 			note_datetime datetime null,
 			note_type_concept_id INT64 not null,
@@ -234,7 +232,9 @@ create table @cdmDatabaseSchema.note (
 			provider_id INT64,
 			visit_occurrence_id INT64,
 			visit_detail_id INT64,
-			note_source_value STRING );
+			note_source_value STRING,
+			note_event_id INT64,
+			note_event_field_concept_id INT64 );
 
 --HINT DISTRIBUTE ON RANDOM
 create table @cdmDatabaseSchema.note_nlp (
@@ -458,7 +458,7 @@ create table @cdmDatabaseSchema.concept (
 create table @cdmDatabaseSchema.vocabulary (
 			vocabulary_id STRING not null,
 			vocabulary_name STRING not null,
-			vocabulary_reference STRING not null,
+			vocabulary_reference STRING,
 			vocabulary_version STRING,
 			vocabulary_concept_id INT64 not null );
 

inst/ddl/5.4/impala/OMOPCDM_impala_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.`location` ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.`location` (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/impala/OMOPCDM_impala_5.4_ddl.sql

@@ -123,6 +123,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			procedure_concept_id INT,
 			procedure_date TIMESTAMP,
 			procedure_datetime TIMESTAMP,
+			procedure_end_date TIMESTAMP,
+			procedure_end_datetime TIMESTAMP,
 			procedure_type_concept_id INT,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -131,9 +133,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			visit_detail_id integer NULL,
 			procedure_source_value VARCHAR(50),
 			procedure_source_concept_id integer NULL,
-			modifier_source_value VARCHAR(50),
+			modifier_source_value VARCHAR(50) );
-			procedure_status_source_value VARCHAR(50),
-			procedure_status_concept_id INT );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
@@ -221,8 +221,6 @@ CREATE TABLE @cdmDatabaseSchema.DEATH (
 CREATE TABLE @cdmDatabaseSchema.NOTE (
 			note_id INT,
 			person_id INT,
-			note_event_id BIGINT,
-			note_event_field_concept_id integer NULL,
 			note_date TIMESTAMP,
 			note_datetime TIMESTAMP,
 			note_type_concept_id INT,
@@ -234,7 +232,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE (
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value VARCHAR(50) );
+			note_source_value VARCHAR(50),
+			note_event_id BIGINT,
+			note_event_field_concept_id integer NULL );
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
@@ -395,14 +395,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.EPISODE (
-			episode_id INT,
+			episode_id BIGINT,
-			person_id INT,
+			person_id BIGINT,
 			episode_concept_id INT,
 			episode_start_date TIMESTAMP,
 			episode_start_datetime TIMESTAMP,
 			episode_end_date TIMESTAMP,
 			episode_end_datetime TIMESTAMP,
-			episode_parent_id integer NULL,
+			episode_parent_id BIGINT,
 			episode_number integer NULL,
 			episode_object_concept_id INT,
 			episode_type_concept_id INT,
@@ -411,8 +411,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE (
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT (
-			episode_id INT,
+			episode_id BIGINT,
-			event_id INT,
+			event_id BIGINT,
 			episode_event_field_concept_id INT );
 
 --HINT DISTRIBUTE ON RANDOM

inst/ddl/5.4/netezza/OMOPCDM_netezza_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/netezza/OMOPCDM_netezza_5.4_ddl.sql

@@ -64,8 +64,8 @@ CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL (
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -123,6 +123,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime TIMESTAMP NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime TIMESTAMP NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -131,9 +133,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL );
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
@@ -221,8 +221,6 @@ CREATE TABLE @cdmDatabaseSchema.DEATH (
 CREATE TABLE @cdmDatabaseSchema.NOTE (
 			note_id integer NOT NULL,
 			person_id integer NOT NULL,
-			note_event_id bigint NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime TIMESTAMP NULL,
 			note_type_concept_id integer NOT NULL,
@@ -234,7 +232,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE (
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL );
+			note_source_value varchar(50) NULL,
+			note_event_id bigint NULL,
+			note_event_field_concept_id integer NULL );
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
@@ -395,14 +395,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.EPISODE (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			person_id integer NOT NULL,
+			person_id bigint NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime TIMESTAMP NULL,
 			episode_end_date date NULL,
 			episode_end_datetime TIMESTAMP NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id bigint NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -411,8 +411,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE (
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			event_id integer NOT NULL,
+			event_id bigint NOT NULL,
 			episode_event_field_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON RANDOM
@@ -458,7 +458,7 @@ CREATE TABLE @cdmDatabaseSchema.CONCEPT (
 CREATE TABLE @cdmDatabaseSchema.VOCABULARY (
 			vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL );
 

inst/ddl/5.4/oracle/OMOPCDM_oracle_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/oracle/OMOPCDM_oracle_5.4_ddl.sql

@@ -64,8 +64,8 @@ CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL (
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -123,6 +123,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime TIMESTAMP NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime TIMESTAMP NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -131,9 +133,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL );
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
@@ -221,8 +221,6 @@ CREATE TABLE @cdmDatabaseSchema.DEATH (
 CREATE TABLE @cdmDatabaseSchema.NOTE (
 			note_id integer NOT NULL,
 			person_id integer NOT NULL,
-			note_event_id NUMBER(19) NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime TIMESTAMP NULL,
 			note_type_concept_id integer NOT NULL,
@@ -234,7 +232,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE (
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL );
+			note_source_value varchar(50) NULL,
+			note_event_id NUMBER(19) NULL,
+			note_event_field_concept_id integer NULL );
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
@@ -395,14 +395,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.EPISODE (
-			episode_id integer NOT NULL,
+			episode_id NUMBER(19) NOT NULL,
-			person_id integer NOT NULL,
+			person_id NUMBER(19) NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime TIMESTAMP NULL,
 			episode_end_date date NULL,
 			episode_end_datetime TIMESTAMP NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id NUMBER(19) NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -411,8 +411,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE (
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT (
-			episode_id integer NOT NULL,
+			episode_id NUMBER(19) NOT NULL,
-			event_id integer NOT NULL,
+			event_id NUMBER(19) NOT NULL,
 			episode_event_field_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON RANDOM
@@ -458,7 +458,7 @@ CREATE TABLE @cdmDatabaseSchema.CONCEPT (
 CREATE TABLE @cdmDatabaseSchema.VOCABULARY (
 			vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL );
 

inst/ddl/5.4/pdw/OMOPCDM_pdw_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/pdw/OMOPCDM_pdw_5.4_ddl.sql

@@ -63,8 +63,8 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.VISIT_DETAIL  (visi
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -122,6 +122,8 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.PROCEDURE_OCCURRENC
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime datetime NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime datetime NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -130,9 +132,7 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.PROCEDURE_OCCURRENC
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL )
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL )
 WITH (DISTRIBUTION = HASH(person_id));
 
 --HINT DISTRIBUTE ON KEY (person_id)
@@ -220,8 +220,6 @@ WITH (DISTRIBUTION = HASH(person_id));
 --HINT DISTRIBUTE ON KEY (person_id)
 IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.NOTE  (note_id integer NOT NULL,
 			 person_id integer NOT NULL,
-			note_event_id bigint NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime datetime NULL,
 			note_type_concept_id integer NOT NULL,
@@ -233,7 +231,9 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.NOTE  (note_id inte
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL )
+			note_source_value varchar(50) NULL,
+			note_event_id bigint NULL,
+			note_event_field_concept_id integer NULL )
 WITH (DISTRIBUTION = HASH(person_id));
 
 --HINT DISTRIBUTE ON RANDOM
@@ -394,14 +394,14 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.CONDITION_ERA  (con
 WITH (DISTRIBUTION = HASH(person_id));
 
 --HINT DISTRIBUTE ON KEY (person_id)
-IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.EPISODE  (episode_id integer NOT NULL,
+IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.EPISODE  (episode_id bigint NOT NULL,
-			 person_id integer NOT NULL,
+			 person_id bigint NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime datetime NULL,
 			episode_end_date date NULL,
 			episode_end_datetime datetime NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id bigint NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -410,8 +410,8 @@ IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.EPISODE  (episode_i
 WITH (DISTRIBUTION = HASH(person_id));
 
 --HINT DISTRIBUTE ON RANDOM
-IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.EPISODE_EVENT  (episode_id integer NOT NULL,
+IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.EPISODE_EVENT  (episode_id bigint NOT NULL,
-			event_id integer NOT NULL,
+			event_id bigint NOT NULL,
 			episode_event_field_concept_id integer NOT NULL )
 WITH (DISTRIBUTION = REPLICATE);
 
@@ -457,7 +457,7 @@ WITH (DISTRIBUTION = REPLICATE);
 --HINT DISTRIBUTE ON RANDOM
 IF XACT_STATE() = 1 COMMIT; CREATE TABLE  @cdmDatabaseSchema.VOCABULARY  (vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL )
 WITH (DISTRIBUTION = REPLICATE);

inst/ddl/5.4/postgresql/OMOPCDM_postgresql_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/postgresql/OMOPCDM_postgresql_5.4_ddl.sql

@@ -64,8 +64,8 @@ CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL (
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -123,6 +123,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime TIMESTAMP NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime TIMESTAMP NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -131,9 +133,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL );
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
@@ -221,8 +221,6 @@ CREATE TABLE @cdmDatabaseSchema.DEATH (
 CREATE TABLE @cdmDatabaseSchema.NOTE (
 			note_id integer NOT NULL,
 			person_id integer NOT NULL,
-			note_event_id bigint NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime TIMESTAMP NULL,
 			note_type_concept_id integer NOT NULL,
@@ -234,7 +232,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE (
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL );
+			note_source_value varchar(50) NULL,
+			note_event_id bigint NULL,
+			note_event_field_concept_id integer NULL );
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
@@ -395,14 +395,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.EPISODE (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			person_id integer NOT NULL,
+			person_id bigint NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime TIMESTAMP NULL,
 			episode_end_date date NULL,
 			episode_end_datetime TIMESTAMP NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id bigint NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -411,8 +411,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE (
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			event_id integer NOT NULL,
+			event_id bigint NOT NULL,
 			episode_event_field_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON RANDOM
@@ -458,7 +458,7 @@ CREATE TABLE @cdmDatabaseSchema.CONCEPT (
 CREATE TABLE @cdmDatabaseSchema.VOCABULARY (
 			vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL );
 

inst/ddl/5.4/redshift/OMOPCDM_redshift_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/redshift/OMOPCDM_redshift_5.4_ddl.sql

@@ -63,8 +63,8 @@ CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL  (visit_detail_id integer NOT NULL,
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -122,6 +122,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE  (procedure_occurrence_id i
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime TIMESTAMP NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime TIMESTAMP NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -130,9 +132,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE  (procedure_occurrence_id i
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL )
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL )
 DISTKEY(person_id);
 
 --HINT DISTRIBUTE ON KEY (person_id)
@@ -220,8 +220,6 @@ DISTKEY(person_id);
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.NOTE  (note_id integer NOT NULL,
 			 person_id integer NOT NULL,
-			note_event_id bigint NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime TIMESTAMP NULL,
 			note_type_concept_id integer NOT NULL,
@@ -233,7 +231,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE  (note_id integer NOT NULL,
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL )
+			note_source_value varchar(50) NULL,
+			note_event_id bigint NULL,
+			note_event_field_concept_id integer NULL )
 DISTKEY(person_id);
 
 --HINT DISTRIBUTE ON RANDOM
@@ -394,14 +394,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA  (condition_era_id integer NOT NUL
 DISTKEY(person_id);
 
 --HINT DISTRIBUTE ON KEY (person_id)
-CREATE TABLE @cdmDatabaseSchema.EPISODE  (episode_id integer NOT NULL,
+CREATE TABLE @cdmDatabaseSchema.EPISODE  (episode_id bigint NOT NULL,
-			 person_id integer NOT NULL,
+			 person_id bigint NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime TIMESTAMP NULL,
 			episode_end_date date NULL,
 			episode_end_datetime TIMESTAMP NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id bigint NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -410,8 +410,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE  (episode_id integer NOT NULL,
 DISTKEY(person_id);
 
 --HINT DISTRIBUTE ON RANDOM
-CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT  (episode_id integer NOT NULL,
+CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT  (episode_id bigint NOT NULL,
-			event_id integer NOT NULL,
+			event_id bigint NOT NULL,
 			episode_event_field_concept_id integer NOT NULL )
 DISTSTYLE ALL;
 
@@ -457,7 +457,7 @@ DISTSTYLE ALL;
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.VOCABULARY  (vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL )
 DISTSTYLE ALL;

inst/ddl/5.4/sql_server/OMOPCDM_sql_server_5.4_constraints.sql

@@ -102,6 +102,14 @@ ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE
 
 ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_modifier_concept_id FOREIGN KEY (modifier_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_provider_id FOREIGN KEY (provider_id) REFERENCES @cdmDatabaseSchema.PROVIDER (PROVIDER_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_occurrence_id FOREIGN KEY (visit_occurrence_id) REFERENCES @cdmDatabaseSchema.VISIT_OCCURRENCE (VISIT_OCCURRENCE_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
+
+ALTER TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ADD CONSTRAINT fpk_PROCEDURE_OCCURRENCE_procedure_source_concept_id FOREIGN KEY (procedure_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_concept_id FOREIGN KEY (device_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -116,6 +124,10 @@ ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSUR
 
 ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_device_source_concept_id FOREIGN KEY (device_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
+ALTER TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ADD CONSTRAINT fpk_DEVICE_EXPOSURE_unit_source_concept_id FOREIGN KEY (unit_source_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
 ALTER TABLE @cdmDatabaseSchema.MEASUREMENT ADD CONSTRAINT fpk_MEASUREMENT_measurement_concept_id FOREIGN KEY (measurement_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -172,8 +184,6 @@ ALTER TABLE @cdmDatabaseSchema.DEATH ADD CONSTRAINT fpk_DEATH_cause_source_conce
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
 
-ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
-
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_type_concept_id FOREIGN KEY (note_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_class_concept_id FOREIGN KEY (note_class_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -188,6 +198,8 @@ ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_occurrence_id
 
 ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_visit_detail_id FOREIGN KEY (visit_detail_id) REFERENCES @cdmDatabaseSchema.VISIT_DETAIL (VISIT_DETAIL_ID);
 
+ALTER TABLE @cdmDatabaseSchema.NOTE ADD CONSTRAINT fpk_NOTE_note_event_field_concept_id FOREIGN KEY (note_event_field_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_section_concept_id FOREIGN KEY (section_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.NOTE_NLP ADD CONSTRAINT fpk_NOTE_NLP_note_nlp_concept_id FOREIGN KEY (note_nlp_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
@@ -212,6 +224,8 @@ ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIO
 
 ALTER TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ADD CONSTRAINT fpk_FACT_RELATIONSHIP_relationship_concept_id FOREIGN KEY (relationship_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.LOCATION ADD CONSTRAINT fpk_LOCATION_country_concept_id FOREIGN KEY (country_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_place_of_service_concept_id FOREIGN KEY (place_of_service_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CARE_SITE ADD CONSTRAINT fpk_CARE_SITE_location_id FOREIGN KEY (location_id) REFERENCES @cdmDatabaseSchema.LOCATION (LOCATION_ID);
@@ -266,6 +280,8 @@ ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_drug_concept
 
 ALTER TABLE @cdmDatabaseSchema.DOSE_ERA ADD CONSTRAINT fpk_DOSE_ERA_unit_concept_id FOREIGN KEY (unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONDITION_ERA ADD CONSTRAINT fpk_CONDITION_ERA_condition_concept_id FOREIGN KEY (condition_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.EPISODE ADD CONSTRAINT fpk_EPISODE_person_id FOREIGN KEY (person_id) REFERENCES @cdmDatabaseSchema.PERSON (PERSON_ID);
@@ -288,6 +304,8 @@ ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_metadata_typ
 
 ALTER TABLE @cdmDatabaseSchema.METADATA ADD CONSTRAINT fpk_METADATA_value_as_concept_id FOREIGN KEY (value_as_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.CDM_SOURCE ADD CONSTRAINT fpk_CDM_SOURCE_cdm_version_concept_id FOREIGN KEY (cdm_version_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
+
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_domain_id FOREIGN KEY (domain_id) REFERENCES @cdmDatabaseSchema.DOMAIN (DOMAIN_ID);
 
 ALTER TABLE @cdmDatabaseSchema.CONCEPT ADD CONSTRAINT fpk_CONCEPT_vocabulary_id FOREIGN KEY (vocabulary_id) REFERENCES @cdmDatabaseSchema.VOCABULARY (VOCABULARY_ID);
@@ -332,6 +350,8 @@ ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_nu
 
 ALTER TABLE @cdmDatabaseSchema.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_denominator_unit_concept_id FOREIGN KEY (denominator_unit_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
+ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_cohort_definition_id FOREIGN KEY (cohort_definition_id) REFERENCES @cdmDatabaseSchema.COHORT (COHORT_DEFINITION_ID);
+
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_definition_type_concept_id FOREIGN KEY (definition_type_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);
 
 ALTER TABLE @cdmDatabaseSchema.COHORT_DEFINITION ADD CONSTRAINT fpk_COHORT_DEFINITION_subject_concept_id FOREIGN KEY (subject_concept_id) REFERENCES @cdmDatabaseSchema.CONCEPT (CONCEPT_ID);

inst/ddl/5.4/sql_server/OMOPCDM_sql_server_5.4_ddl.sql

@@ -64,8 +64,8 @@ CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL (
 			visit_detail_source_value varchar(50) NULL,
 			visit_detail_source_concept_id Integer NULL,
 			admitted_from_concept_id Integer NULL,
-			admitted_from_source_value Varchar(50) NULL,
+			admitted_from_source_value varchar(50) NULL,
-			discharged_to_source_value Varchar(50) NULL,
+			discharged_to_source_value varchar(50) NULL,
 			discharged_to_concept_id integer NULL,
 			preceding_visit_detail_id integer NULL,
 			parent_visit_detail_id integer NULL,
@@ -123,6 +123,8 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			procedure_concept_id integer NOT NULL,
 			procedure_date date NOT NULL,
 			procedure_datetime datetime NULL,
+			procedure_end_date date NULL,
+			procedure_end_datetime datetime NULL,
 			procedure_type_concept_id integer NOT NULL,
 			modifier_concept_id integer NULL,
 			quantity integer NULL,
@@ -131,9 +133,7 @@ CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE (
 			visit_detail_id integer NULL,
 			procedure_source_value varchar(50) NULL,
 			procedure_source_concept_id integer NULL,
-			modifier_source_value varchar(50) NULL,
+			modifier_source_value varchar(50) NULL );
-			procedure_status_source_value varchar(50) NULL,
-			procedure_status_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE (
@@ -221,8 +221,6 @@ CREATE TABLE @cdmDatabaseSchema.DEATH (
 CREATE TABLE @cdmDatabaseSchema.NOTE (
 			note_id integer NOT NULL,
 			person_id integer NOT NULL,
-			note_event_id bigint NULL,
-			note_event_field_concept_id integer NULL,
 			note_date date NOT NULL,
 			note_datetime datetime NULL,
 			note_type_concept_id integer NOT NULL,
@@ -234,7 +232,9 @@ CREATE TABLE @cdmDatabaseSchema.NOTE (
 			provider_id integer NULL,
 			visit_occurrence_id integer NULL,
 			visit_detail_id integer NULL,
-			note_source_value varchar(50) NULL );
+			note_source_value varchar(50) NULL,
+			note_event_id bigint NULL,
+			note_event_field_concept_id integer NULL );
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.NOTE_NLP (
@@ -395,14 +395,14 @@ CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA (
 
 --HINT DISTRIBUTE ON KEY (person_id)
 CREATE TABLE @cdmDatabaseSchema.EPISODE (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			person_id integer NOT NULL,
+			person_id bigint NOT NULL,
 			episode_concept_id integer NOT NULL,
 			episode_start_date date NOT NULL,
 			episode_start_datetime datetime NULL,
 			episode_end_date date NULL,
 			episode_end_datetime datetime NULL,
-			episode_parent_id integer NULL,
+			episode_parent_id bigint NULL,
 			episode_number integer NULL,
 			episode_object_concept_id integer NOT NULL,
 			episode_type_concept_id integer NOT NULL,
@@ -411,8 +411,8 @@ CREATE TABLE @cdmDatabaseSchema.EPISODE (
 
 --HINT DISTRIBUTE ON RANDOM
 CREATE TABLE @cdmDatabaseSchema.EPISODE_EVENT (
-			episode_id integer NOT NULL,
+			episode_id bigint NOT NULL,
-			event_id integer NOT NULL,
+			event_id bigint NOT NULL,
 			episode_event_field_concept_id integer NOT NULL );
 
 --HINT DISTRIBUTE ON RANDOM
@@ -458,7 +458,7 @@ CREATE TABLE @cdmDatabaseSchema.CONCEPT (
 CREATE TABLE @cdmDatabaseSchema.VOCABULARY (
 			vocabulary_id varchar(20) NOT NULL,
 			vocabulary_name varchar(255) NOT NULL,
-			vocabulary_reference varchar(255) NOT NULL,
+			vocabulary_reference varchar(255) NULL,
 			vocabulary_version varchar(255) NULL,
 			vocabulary_concept_id integer NOT NULL );