Corrections after results from testers
This commit is contained in:
Clair Blacketer
parent
4d53d7d75b
commit
9e4ae062d9
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@ -44,16 +44,16 @@ Standardized vocabulary
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE concept (
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concept_id INTEGER NOT NULL ,
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concept_name VARCHAR(255) NOT NULL ,
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concept_id INTEGER NOT NULL ,
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concept_name VARCHAR(255) NOT NULL ,
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domain_id VARCHAR(20) NOT NULL ,
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vocabulary_id VARCHAR(20) NOT NULL ,
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concept_class_id VARCHAR(20) NOT NULL ,
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standard_concept VARCHAR(1) NULL ,
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concept_code VARCHAR(50) NOT NULL ,
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valid_start_date DATE NOT NULL ,
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valid_end_date DATE NOT NULL ,
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invalid_reason VARCHAR(1) NULL
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vocabulary_id VARCHAR(20) NOT NULL ,
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concept_class_id VARCHAR(20) NOT NULL ,
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standard_concept VARCHAR(1) NULL ,
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concept_code VARCHAR(50) NOT NULL ,
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valid_start_date DATE NOT NULL ,
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valid_end_date DATE NOT NULL ,
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invalid_reason VARCHAR(1) NULL
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)
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;
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@ -62,9 +62,9 @@ CREATE TABLE concept (
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CREATE TABLE vocabulary (
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vocabulary_id VARCHAR(20) NOT NULL,
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vocabulary_name VARCHAR(255) NOT NULL,
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vocabulary_reference VARCHAR(255) NOT NULL,
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vocabulary_version VARCHAR(255) NOT NULL,
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vocabulary_concept_id INTEGER NOT NULL
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vocabulary_reference VARCHAR(255) NOT NULL,
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vocabulary_version VARCHAR(255) NOT NULL,
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vocabulary_concept_id INTEGER NOT NULL
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)
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;
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@ -73,7 +73,7 @@ CREATE TABLE vocabulary (
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CREATE TABLE domain (
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domain_id VARCHAR(20) NOT NULL,
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domain_name VARCHAR(255) NOT NULL,
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domain_concept_id INTEGER NOT NULL
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domain_concept_id INTEGER NOT NULL
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)
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;
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@ -82,7 +82,7 @@ CREATE TABLE domain (
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CREATE TABLE concept_class (
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concept_class_id VARCHAR(20) NOT NULL,
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concept_class_name VARCHAR(255) NOT NULL,
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concept_class_concept_id INTEGER NOT NULL
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concept_class_concept_id INTEGER NOT NULL
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)
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;
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@ -91,31 +91,31 @@ CREATE TABLE concept_class (
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CREATE TABLE concept_relationship (
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concept_id_1 INTEGER NOT NULL,
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concept_id_2 INTEGER NOT NULL,
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relationship_id VARCHAR(20) NOT NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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invalid_reason VARCHAR(1) NULL
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relationship_id VARCHAR(20) NOT NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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invalid_reason VARCHAR(1) NULL
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)
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;
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE relationship (
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relationship_id VARCHAR(20) NOT NULL,
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relationship_name VARCHAR(255) NOT NULL,
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is_hierarchical VARCHAR(1) NOT NULL,
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defines_ancestry VARCHAR(1) NOT NULL,
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relationship_id VARCHAR(20) NOT NULL,
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relationship_name VARCHAR(255) NOT NULL,
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is_hierarchical VARCHAR(1) NOT NULL,
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defines_ancestry VARCHAR(1) NOT NULL,
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reverse_relationship_id VARCHAR(20) NOT NULL,
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relationship_concept_id INTEGER NOT NULL
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relationship_concept_id INTEGER NOT NULL
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)
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;
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE concept_synonym (
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concept_id INTEGER NOT NULL,
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concept_synonym_name VARCHAR(1000) NOT NULL,
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language_concept_id INTEGER NOT NULL
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concept_id INTEGER NOT NULL,
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concept_synonym_name VARCHAR(1000) NOT NULL,
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language_concept_id INTEGER NOT NULL
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)
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;
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@ -123,23 +123,23 @@ CREATE TABLE concept_synonym (
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE concept_ancestor (
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ancestor_concept_id INTEGER NOT NULL,
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descendant_concept_id INTEGER NOT NULL,
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min_levels_of_separation INTEGER NOT NULL,
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max_levels_of_separation INTEGER NOT NULL
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descendant_concept_id INTEGER NOT NULL,
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min_levels_of_separation INTEGER NOT NULL,
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max_levels_of_separation INTEGER NOT NULL
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)
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;
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE source_to_concept_map (
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source_code VARCHAR(50) NOT NULL,
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source_concept_id INTEGER NOT NULL,
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source_vocabulary_id VARCHAR(20) NOT NULL,
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source_code_description VARCHAR(255) NULL,
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target_concept_id INTEGER NOT NULL,
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target_vocabulary_id VARCHAR(20) NOT NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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source_code VARCHAR(50) NOT NULL,
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source_concept_id INTEGER NOT NULL,
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source_vocabulary_id VARCHAR(20) NOT NULL,
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source_code_description VARCHAR(255) NULL,
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target_concept_id INTEGER NOT NULL,
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target_vocabulary_id VARCHAR(20) NOT NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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invalid_reason VARCHAR(1) NULL
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)
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;
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@ -147,42 +147,18 @@ CREATE TABLE source_to_concept_map (
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE drug_strength (
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drug_concept_id INTEGER NOT NULL,
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ingredient_concept_id INTEGER NOT NULL,
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amount_value FLOAT NULL,
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amount_unit_concept_id INTEGER NULL,
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numerator_value FLOAT NULL,
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drug_concept_id INTEGER NOT NULL,
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ingredient_concept_id INTEGER NOT NULL,
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amount_value FLOAT NULL,
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amount_unit_concept_id INTEGER NULL,
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numerator_value FLOAT NULL,
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numerator_unit_concept_id INTEGER NULL,
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denominator_value FLOAT NULL,
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denominator_value FLOAT NULL,
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denominator_unit_concept_id INTEGER NULL,
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box_size INTEGER NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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invalid_reason VARCHAR(1) NULL
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)
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;
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE cohort_definition (
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cohort_definition_id INTEGER NOT NULL,
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cohort_definition_name VARCHAR(255) NOT NULL,
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cohort_definition_description VARCHAR(MAX) NULL,
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definition_type_concept_id INTEGER NOT NULL,
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cohort_definition_syntax VARCHAR(MAX) NULL,
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subject_concept_id INTEGER NOT NULL,
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cohort_initiation_date DATE NULL
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)
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;
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE attribute_definition (
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attribute_definition_id INTEGER NOT NULL,
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attribute_name VARCHAR(255) NOT NULL,
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attribute_description VARCHAR(MAX) NULL,
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attribute_type_concept_id INTEGER NOT NULL,
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attribute_syntax VARCHAR(MAX) NULL
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box_size INTEGER NULL,
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valid_start_date DATE NOT NULL,
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valid_end_date DATE NOT NULL,
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invalid_reason VARCHAR(1) NULL
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)
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;
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@ -197,16 +173,16 @@ Standardized meta-data
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--HINT DISTRIBUTE ON RANDOM
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CREATE TABLE cdm_source
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(
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cdm_source_name VARCHAR(255) NOT NULL ,
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cdm_source_abbreviation VARCHAR(25) NULL ,
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cdm_holder VARCHAR(255) NULL ,
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source_description VARCHAR(MAX) NULL ,
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cdm_source_name VARCHAR(255) NOT NULL ,
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cdm_source_abbreviation VARCHAR(25) NULL ,
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cdm_holder VARCHAR(255) NULL ,
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source_description VARCHAR(MAX) NULL ,
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source_documentation_reference VARCHAR(255) NULL ,
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cdm_etl_reference VARCHAR(255) NULL ,
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source_release_date DATE NULL ,
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cdm_release_date DATE NULL ,
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cdm_version VARCHAR(10) NULL ,
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vocabulary_version VARCHAR(20) NULL
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cdm_etl_reference VARCHAR(255) NULL ,
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source_release_date DATE NULL ,
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cdm_release_date DATE NULL ,
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cdm_version VARCHAR(10) NULL ,
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vocabulary_version VARCHAR(20) NULL
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)
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;
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@ -220,12 +196,12 @@ CREATE TABLE metadata
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value_as_string VARCHAR(MAX) NULL ,
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value_as_concept_id INTEGER NULL ,
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metadata_date DATE NULL ,
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metadata_datetime DATETIME2 NULL
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metadata_datetime DATETIME2 NULL
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)
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;
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INSERT INTO metadata (name, value_as_string) --Added cdm version record
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VALUES ('CDM Version', '6.0')
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INSERT INTO metadata (metadata_concept_id, metadata_type_concept_id, name, value_as_string, value_as_concept_id, metadata_date, metadata_datetime) --Added cdm version record
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VALUES (0,0,'CDM Version', '6.0',0,NULL,NULL)
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;
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@ -239,24 +215,24 @@ Standardized clinical data
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE person
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(
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person_id BIGINT NOT NULL , --BIGINTs added
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gender_concept_id INTEGER NOT NULL ,
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person_id BIGINT NOT NULL , --BIGINTs added
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gender_concept_id INTEGER NOT NULL ,
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year_of_birth INTEGER NOT NULL ,
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month_of_birth INTEGER NULL,
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day_of_birth INTEGER NULL,
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birth_datetime DATETIME2 NULL,
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race_concept_id INTEGER NOT NULL,
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ethnicity_concept_id INTEGER NOT NULL,
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location_id INTEGER NULL,
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provider_id INTEGER NULL,
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care_site_id INTEGER NULL,
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person_source_value VARCHAR(50) NULL,
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gender_source_value VARCHAR(50) NULL,
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gender_source_concept_id INTEGER NULL,
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race_source_value VARCHAR(50) NULL,
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race_source_concept_id INTEGER NULL,
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ethnicity_source_value VARCHAR(50) NULL,
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ethnicity_source_concept_id INTEGER NULL
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birth_datetime DATETIME2 NULL,
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race_concept_id INTEGER NOT NULL,
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ethnicity_concept_id INTEGER NOT NULL,
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location_id BIGINT NULL,
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provider_id BIGINT NULL,
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care_site_id BIGINT NULL,
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person_source_value VARCHAR(50) NULL,
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gender_source_value VARCHAR(50) NULL,
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gender_source_concept_id INTEGER NULL,
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race_source_value VARCHAR(50) NULL,
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race_source_concept_id INTEGER NULL,
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ethnicity_source_value VARCHAR(50) NULL,
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ethnicity_source_concept_id INTEGER NULL
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)
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;
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@ -264,11 +240,11 @@ CREATE TABLE person
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE observation_period
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(
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observation_period_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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observation_period_start_date DATE NOT NULL ,
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observation_period_end_date DATE NOT NULL ,
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period_type_concept_id INTEGER NOT NULL
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observation_period_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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observation_period_start_date DATE NOT NULL ,
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observation_period_end_date DATE NOT NULL ,
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period_type_concept_id INTEGER NOT NULL
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)
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;
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@ -276,59 +252,59 @@ CREATE TABLE observation_period
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE specimen
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(
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specimen_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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specimen_concept_id INTEGER NOT NULL ,
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specimen_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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specimen_concept_id INTEGER NOT NULL ,
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specimen_type_concept_id INTEGER NOT NULL ,
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specimen_date DATE NULL ,
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specimen_datetime DATETIME2 NOT NULL ,
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quantity FLOAT NULL ,
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unit_concept_id INTEGER NULL ,
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specimen_date DATE NULL ,
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specimen_datetime DATETIME2 NOT NULL ,
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quantity FLOAT NULL ,
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unit_concept_id INTEGER NULL ,
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anatomic_site_concept_id INTEGER NULL ,
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disease_status_concept_id INTEGER NULL ,
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specimen_source_id VARCHAR(50) NULL ,
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specimen_source_value VARCHAR(50) NULL ,
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unit_source_value VARCHAR(50) NULL ,
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anatomic_site_source_value VARCHAR(50) NULL ,
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disease_status_source_value VARCHAR(50) NULL
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specimen_source_id VARCHAR(50) NULL ,
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specimen_source_value VARCHAR(50) NULL ,
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unit_source_value VARCHAR(50) NULL ,
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anatomic_site_source_value VARCHAR(50) NULL ,
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disease_status_source_value VARCHAR(50) NULL
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE death
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/*CREATE TABLE death
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(
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person_id BIGINT NOT NULL ,
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death_date DATE NULL ,
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death_datetime DATETIME2 NOT NULL ,
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death_type_concept_id INTEGER NOT NULL ,
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cause_concept_id INTEGER NULL ,
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cause_source_value VARCHAR(50) NULL,
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cause_source_concept_id INTEGER NULL
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person_id BIGINT NOT NULL ,
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death_date DATE NULL ,
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death_datetime DATETIME2 NOT NULL ,
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death_type_concept_id INTEGER NOT NULL ,
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cause_concept_id INTEGER NULL ,
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cause_source_value VARCHAR(50) NULL,
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cause_source_concept_id INTEGER NULL
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)
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;
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;*/
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE visit_occurrence
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(
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visit_occurrence_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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visit_concept_id INTEGER NOT NULL ,
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visit_start_date DATE NULL ,
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visit_start_datetime DATETIME2 NOT NULL ,
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visit_end_date DATE NULL ,
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visit_end_datetime DATETIME2 NOT NULL ,
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visit_type_concept_id INTEGER NOT NULL ,
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provider_id INTEGER NULL,
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care_site_id INTEGER NULL,
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visit_source_value VARCHAR(50) NULL,
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visit_source_concept_id INTEGER NULL ,
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admitted_from_concept_id INTEGER NULL , /*Changed from admitting_source_* */
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admitted_from_source_value VARCHAR(50) NULL ,
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discharge_to_source_value VARCHAR(50) NULL ,
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discharge_to_concept_id INTEGER NULL ,
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preceding_visit_occurrence_id INTEGER NULL
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visit_occurrence_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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visit_concept_id INTEGER NOT NULL ,
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visit_start_date DATE NULL ,
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visit_start_datetime DATETIME2 NOT NULL ,
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visit_end_date DATE NULL ,
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visit_end_datetime DATETIME2 NOT NULL ,
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visit_type_concept_id INTEGER NOT NULL ,
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provider_id BIGINT NULL,
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care_site_id BIGINT NULL,
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visit_source_value VARCHAR(50) NULL,
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visit_source_concept_id INTEGER NULL ,
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admitted_from_concept_id INTEGER NULL , /*Changed from admitting_source_* */
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admitted_from_source_value VARCHAR(50) NULL ,
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discharge_to_source_value VARCHAR(50) NULL ,
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discharge_to_concept_id INTEGER NULL ,
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preceding_visit_occurrence_id BIGINT NULL
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)
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;
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@ -344,8 +320,8 @@ CREATE TABLE visit_detail
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visit_detail_end_date DATE NULL ,
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visit_detail_end_datetime DATETIME2 NOT NULL ,
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visit_detail_type_concept_id INTEGER NOT NULL ,
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provider_id INTEGER NULL ,
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care_site_id INTEGER NULL ,
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provider_id BIGINT NULL ,
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care_site_id BIGINT NULL ,
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discharge_to_concept_id INTEGER NULL ,
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admitted_from_concept_id INTEGER NULL , /*Changed from admitting_source_* */
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admitted_from_source_value VARCHAR(50) NULL ,
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@ -362,20 +338,20 @@ CREATE TABLE visit_detail
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE procedure_occurrence
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(
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procedure_occurrence_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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procedure_concept_id INTEGER NOT NULL ,
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procedure_date DATE NULL ,
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procedure_datetime DATETIME2 NOT NULL ,
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procedure_occurrence_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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procedure_concept_id INTEGER NOT NULL ,
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procedure_date DATE NULL ,
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procedure_datetime DATETIME2 NOT NULL ,
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procedure_type_concept_id INTEGER NOT NULL ,
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modifier_concept_id INTEGER NULL ,
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quantity INTEGER NULL ,
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provider_id INTEGER NULL ,
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visit_occurrence_id INTEGER NULL ,
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visit_detail_id INTEGER NULL ,
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procedure_source_value VARCHAR(50) NULL ,
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modifier_concept_id INTEGER NULL ,
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quantity INTEGER NULL ,
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provider_id BIGINT NULL ,
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visit_occurrence_id BIGINT NULL ,
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visit_detail_id BIGINT NULL ,
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procedure_source_value VARCHAR(50) NULL ,
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procedure_source_concept_id INTEGER NULL ,
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modifier_source_value VARCHAR(50) NULL ,
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modifier_source_value VARCHAR(50) NULL
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)
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;
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@ -383,29 +359,29 @@ CREATE TABLE procedure_occurrence
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--HINT DISTRIBUTE_ON_KEY(person_id)
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CREATE TABLE drug_exposure
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(
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drug_exposure_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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drug_concept_id INTEGER NOT NULL ,
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drug_exposure_start_date DATE NULL ,
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drug_exposure_start_datetime DATETIME2 NOT NULL ,
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drug_exposure_end_date DATE NULL ,
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drug_exposure_end_datetime DATETIME2 NOT NULL ,
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verbatim_end_date DATE NULL ,
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drug_type_concept_id INTEGER NOT NULL ,
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stop_reason VARCHAR(20) NULL ,
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refills INTEGER NULL ,
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quantity FLOAT NULL ,
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days_supply INTEGER NULL ,
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sig VARCHAR(MAX) NULL ,
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route_concept_id INTEGER NULL ,
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lot_number VARCHAR(50) NULL ,
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provider_id INTEGER NULL ,
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visit_occurrence_id INTEGER NULL ,
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visit_detail_id INTEGER NULL ,
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drug_source_value VARCHAR(50) NULL ,
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drug_source_concept_id INTEGER NULL ,
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route_source_value VARCHAR(50) NULL ,
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dose_unit_source_value VARCHAR(50) NULL
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drug_exposure_id BIGINT NOT NULL ,
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person_id BIGINT NOT NULL ,
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drug_concept_id INTEGER NOT NULL ,
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drug_exposure_start_date DATE NULL ,
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||||
drug_exposure_start_datetime DATETIME2 NOT NULL ,
|
||||
drug_exposure_end_date DATE NULL ,
|
||||
drug_exposure_end_datetime DATETIME2 NOT NULL ,
|
||||
verbatim_end_date DATE NULL ,
|
||||
drug_type_concept_id INTEGER NOT NULL ,
|
||||
stop_reason VARCHAR(20) NULL ,
|
||||
refills INTEGER NULL ,
|
||||
quantity FLOAT NULL ,
|
||||
days_supply INTEGER NULL ,
|
||||
sig VARCHAR(MAX) NULL ,
|
||||
route_concept_id INTEGER NULL ,
|
||||
lot_number VARCHAR(50) NULL ,
|
||||
provider_id BIGINT NULL ,
|
||||
visit_occurrence_id BIGINT NULL ,
|
||||
visit_detail_id BIGINT NULL ,
|
||||
drug_source_value VARCHAR(50) NULL ,
|
||||
drug_source_concept_id INTEGER NULL ,
|
||||
route_source_value VARCHAR(50) NULL ,
|
||||
dose_unit_source_value VARCHAR(50) NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
@ -413,21 +389,21 @@ CREATE TABLE drug_exposure
|
|||
--HINT DISTRIBUTE_ON_KEY(person_id)
|
||||
CREATE TABLE device_exposure
|
||||
(
|
||||
device_exposure_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
device_concept_id INTEGER NOT NULL ,
|
||||
device_exposure_start_date DATE NULL ,
|
||||
device_exposure_start_datetime DATETIME2 NOT NULL ,
|
||||
device_exposure_end_date DATE NULL ,
|
||||
device_exposure_end_datetime DATETIME2 NULL ,
|
||||
device_type_concept_id INTEGER NOT NULL ,
|
||||
unique_device_id VARCHAR(50) NULL ,
|
||||
quantity INTEGER NULL ,
|
||||
provider_id INTEGER NULL ,
|
||||
visit_occurrence_id INTEGER NULL ,
|
||||
visit_detail_id INTEGER NULL ,
|
||||
device_source_value VARCHAR(100) NULL ,
|
||||
device_source_concept_id INTEGER NULL
|
||||
device_exposure_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
device_concept_id INTEGER NOT NULL ,
|
||||
device_exposure_start_date DATE NULL ,
|
||||
device_exposure_start_datetime DATETIME2 NOT NULL ,
|
||||
device_exposure_end_date DATE NULL ,
|
||||
device_exposure_end_datetime DATETIME2 NULL ,
|
||||
device_type_concept_id INTEGER NOT NULL ,
|
||||
unique_device_id VARCHAR(50) NULL ,
|
||||
quantity INTEGER NULL ,
|
||||
provider_id BIGINT NULL ,
|
||||
visit_occurrence_id BIGINT NULL ,
|
||||
visit_detail_id BIGINT NULL ,
|
||||
device_source_value VARCHAR(100) NULL ,
|
||||
device_source_concept_id INTEGER NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
@ -435,22 +411,22 @@ CREATE TABLE device_exposure
|
|||
--HINT DISTRIBUTE_ON_KEY(person_id)
|
||||
CREATE TABLE condition_occurrence
|
||||
(
|
||||
condition_occurrence_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
condition_concept_id INTEGER NOT NULL ,
|
||||
condition_start_date DATE NULL ,
|
||||
condition_start_datetime DATETIME2 NOT NULL ,
|
||||
condition_end_date DATE NULL ,
|
||||
condition_end_datetime DATETIME2 NULL ,
|
||||
condition_type_concept_id INTEGER NOT NULL ,
|
||||
condition_status_concept_id INTEGER NULL ,
|
||||
stop_reason VARCHAR(20) NULL ,
|
||||
provider_id INTEGER NULL ,
|
||||
visit_occurrence_id INTEGER NULL ,
|
||||
visit_detail_id INTEGER NULL ,
|
||||
condition_source_value VARCHAR(50) NULL ,
|
||||
condition_source_concept_id INTEGER NULL ,
|
||||
condition_status_source_value VARCHAR(50) NULL
|
||||
condition_occurrence_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
condition_concept_id INTEGER NOT NULL ,
|
||||
condition_start_date DATE NULL ,
|
||||
condition_start_datetime DATETIME2 NOT NULL ,
|
||||
condition_end_date DATE NULL ,
|
||||
condition_end_datetime DATETIME2 NULL ,
|
||||
condition_type_concept_id INTEGER NOT NULL ,
|
||||
condition_status_concept_id INTEGER NULL ,
|
||||
stop_reason VARCHAR(20) NULL ,
|
||||
provider_id BIGINT NULL ,
|
||||
visit_occurrence_id BIGINT NULL ,
|
||||
visit_detail_id BIGINT NULL ,
|
||||
condition_source_value VARCHAR(50) NULL ,
|
||||
condition_source_concept_id INTEGER NULL ,
|
||||
condition_status_source_value VARCHAR(50) NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
@ -458,26 +434,26 @@ CREATE TABLE condition_occurrence
|
|||
--HINT DISTRIBUTE_ON_KEY(person_id)
|
||||
CREATE TABLE measurement
|
||||
(
|
||||
measurement_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
measurement_concept_id INTEGER NOT NULL ,
|
||||
measurement_date DATE NULL ,
|
||||
measurement_datetime DATETIME2 NOT NULL ,
|
||||
measurement_time VARCHAR(10) NULL,
|
||||
measurement_type_concept_id INTEGER NOT NULL ,
|
||||
operator_concept_id INTEGER NULL ,
|
||||
value_as_number FLOAT NULL ,
|
||||
value_as_concept_id INTEGER NULL ,
|
||||
unit_concept_id INTEGER NULL ,
|
||||
range_low FLOAT NULL ,
|
||||
range_high FLOAT NULL ,
|
||||
provider_id INTEGER NULL ,
|
||||
visit_occurrence_id INTEGER NULL ,
|
||||
visit_detail_id INTEGER NULL ,
|
||||
measurement_source_value VARCHAR(50) NULL ,
|
||||
measurement_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
measurement_concept_id INTEGER NOT NULL ,
|
||||
measurement_date DATE NULL ,
|
||||
measurement_datetime DATETIME2 NOT NULL ,
|
||||
measurement_time VARCHAR(10) NULL,
|
||||
measurement_type_concept_id INTEGER NOT NULL ,
|
||||
operator_concept_id INTEGER NULL ,
|
||||
value_as_number FLOAT NULL ,
|
||||
value_as_concept_id INTEGER NULL ,
|
||||
unit_concept_id INTEGER NULL ,
|
||||
range_low FLOAT NULL ,
|
||||
range_high FLOAT NULL ,
|
||||
provider_id BIGINT NULL ,
|
||||
visit_occurrence_id BIGINT NULL ,
|
||||
visit_detail_id BIGINT NULL ,
|
||||
measurement_source_value VARCHAR(50) NULL ,
|
||||
measurement_source_concept_id INTEGER NULL ,
|
||||
unit_source_value VARCHAR(50) NULL ,
|
||||
value_source_value VARCHAR(50) NULL
|
||||
unit_source_value VARCHAR(50) NULL ,
|
||||
value_source_value VARCHAR(50) NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
@ -485,23 +461,23 @@ CREATE TABLE measurement
|
|||
--HINT DISTRIBUTE_ON_KEY(person_id)
|
||||
CREATE TABLE note
|
||||
(
|
||||
note_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
note_event_id BIGINT NULL , --This and the field below added
|
||||
note_domain_id VARCHAR(20) NULL , --This field may be removed in favor of the one below
|
||||
--note_event_table_concept_id INTEGER NULL , --This may be added based on 9/4 meeting
|
||||
note_date DATE NULL ,
|
||||
note_datetime DATETIME2 NOT NULL ,
|
||||
note_type_concept_id INTEGER NOT NULL ,
|
||||
note_class_concept_id INTEGER NOT NULL ,
|
||||
note_title VARCHAR(250) NULL ,
|
||||
note_text VARCHAR(MAX) NULL ,
|
||||
encoding_concept_id INTEGER NOT NULL ,
|
||||
language_concept_id INTEGER NOT NULL ,
|
||||
provider_id INTEGER NULL ,
|
||||
visit_occurrence_id INTEGER NULL ,
|
||||
visit_detail_id INTEGER NULL ,
|
||||
note_source_value VARCHAR(50) NULL
|
||||
note_id BIGINT NOT NULL ,
|
||||
person_id BIGINT NOT NULL ,
|
||||
note_event_id BIGINT NULL ,
|
||||
note_event_domain_id VARCHAR(20) NULL ,
|
||||
note_event_field_concept_id INTEGER NULL ,
|
||||
note_date DATE NULL ,
|
||||
note_datetime DATETIME2 NOT NULL ,
|
||||
note_type_concept_id INTEGER NOT NULL ,
|
||||
note_class_concept_id INTEGER NOT NULL ,
|
||||
note_title VARCHAR(250) NULL ,
|
||||
note_text VARCHAR(MAX) NULL ,
|
||||
encoding_concept_id INTEGER NOT NULL ,
|
||||
language_concept_id INTEGER NOT NULL ,
|
||||
provider_id BIGINT NULL ,
|
||||
visit_occurrence_id BIGINT NULL ,
|
||||
visit_detail_id BIGINT NULL ,
|
||||
note_source_value VARCHAR(50) NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
@ -509,20 +485,20 @@ CREATE TABLE note
|
|||
--HINT DISTRIBUTE ON RANDOM
|
||||
CREATE TABLE note_nlp
|
||||
(
|
||||
note_nlp_id BIGINT NOT NULL ,
|
||||
note_id BIGINT NOT NULL ,
|
||||
section_concept_id INTEGER NULL ,
|
||||
snippet VARCHAR(250) NULL ,
|
||||
"offset" VARCHAR(250) NULL ,
|
||||
lexical_variant VARCHAR(250) NOT NULL ,
|
||||
note_nlp_concept_id INTEGER NULL ,
|
||||
nlp_system VARCHAR(250) NULL ,
|
||||
nlp_date DATE NOT NULL ,
|
||||
nlp_datetime DATETIME2 NULL ,
|
||||
term_exists VARCHAR(1) NULL ,
|
||||
term_temporal VARCHAR(50) NULL ,
|
||||
term_modifiers VARCHAR(2000) NULL ,
|
||||
note_nlp_source_concept_id INTEGER NULL
|
||||
note_nlp_id BIGINT NOT NULL ,
|
||||
note_id BIGINT NOT NULL ,
|
||||
section_concept_id INTEGER NULL ,
|
||||
snippet VARCHAR(250) NULL ,
|
||||
"offset" VARCHAR(250) NULL ,
|
||||
lexical_variant VARCHAR(250) NOT NULL ,
|
||||
note_nlp_concept_id INTEGER NULL ,
|
||||
nlp_system VARCHAR(250) NULL ,
|
||||
nlp_date DATE NOT NULL ,
|
||||
nlp_datetime DATETIME2 NULL ,
|
||||
term_exists VARCHAR(1) NULL ,
|
||||
term_temporal VARCHAR(50) NULL ,
|
||||
term_modifiers VARCHAR(2000) NULL ,
|
||||
note_nlp_source_concept_id INTEGER NULL
|
||||
)
|
||||
;
|
||||
|
||||
|
|
|
|||
Loading…
Reference in New Issue