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Code Issues Packages Projects Releases Wiki Activity

Adds link directly to DDLs 

Closes #471
This commit is contained in:
Clair Blacketer 2022-01-13 11:01:36 -05:00
parent 15f5fb1ed5
commit ed3a4a49a3
3 changed files with 46 additions and 86 deletions
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2
README.md
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@ -10,6 +10,8 @@ output:
# How to Use this Repository
If you are looking for the SQL DDLs and don't wish to generate them through R, they can be accessed [here](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4).
If you are looking for information on how to submit a bugfix, skip to the [next section](https://github.com/OHDSI/CommonDataModel#bug-fixesmodel-updates)
## Generating the DDLs

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docs/index.html
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@ -11,15 +11,24 @@
<title>index.utf8</title>
<title>index.knit</title>
<script src="site_libs/header-attrs-2.6/header-attrs.js"></script>
<script src="site_libs/jquery-1.11.3/jquery.min.js"></script>
<script src="site_libs/header-attrs-2.11/header-attrs.js"></script>
<script src="site_libs/jquery-3.6.0/jquery-3.6.0.min.js"></script>
<meta name="viewport" content="width=device-width, initial-scale=1" />
<link href="site_libs/bootstrap-3.3.5/css/cosmo.min.css" rel="stylesheet" />
<script src="site_libs/bootstrap-3.3.5/js/bootstrap.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/html5shiv.min.js"></script>
<script src="site_libs/bootstrap-3.3.5/shim/respond.min.js"></script>
<style>h1 {font-size: 34px;}
h1.title {font-size: 38px;}
h2 {font-size: 30px;}
h3 {font-size: 24px;}
h4 {font-size: 18px;}
h5 {font-size: 16px;}
h6 {font-size: 12px;}
code {color: inherit; background-color: rgba(0, 0, 0, 0.04);}
pre:not([class]) { background-color: white }</style>
<script src="site_libs/navigation-1.1/tabsets.js"></script>
<link href="site_libs/highlightjs-9.12.0/default.css" rel="stylesheet" />
<script src="site_libs/highlightjs-9.12.0/highlight.js"></script>
@ -37,11 +46,6 @@
</style>
<style type="text/css">code{white-space: pre;}</style>
<style type="text/css">
pre:not([class]) {
background-color: white;
}
</style>
<script type="text/javascript">
if (window.hljs) {
hljs.configure({languages: []});
@ -54,32 +58,6 @@ if (window.hljs) {
<style type="text/css">
h1 {
font-size: 34px;
}
h1.title {
font-size: 38px;
}
h2 {
font-size: 30px;
}
h3 {
font-size: 24px;
}
h4 {
font-size: 18px;
}
h5 {
font-size: 16px;
}
h6 {
font-size: 12px;
}
.table th:not([align]) {
text-align: left;
}
</style>
<link rel="stylesheet" href="style.css" type="text/css" />
@ -92,10 +70,6 @@ h6 {
margin-left: auto;
margin-right: auto;
}
code {
color: inherit;
background-color: rgba(0, 0, 0, 0.04);
}
img {
max-width:100%;
}
@ -111,40 +85,13 @@ button.code-folding-btn:focus {
summary {
display: list-item;
}
pre code {
padding: 0;
}
</style>
<style type="text/css">
/* padding for bootstrap navbar */
body {
padding-top: 51px;
padding-bottom: 40px;
}
/* offset scroll position for anchor links (for fixed navbar) */
.section h1 {
padding-top: 56px;
margin-top: -56px;
}
.section h2 {
padding-top: 56px;
margin-top: -56px;
}
.section h3 {
padding-top: 56px;
margin-top: -56px;
}
.section h4 {
padding-top: 56px;
margin-top: -56px;
}
.section h5 {
padding-top: 56px;
margin-top: -56px;
}
.section h6 {
padding-top: 56px;
margin-top: -56px;
}
.dropdown-submenu {
position: relative;
}
@ -172,7 +119,7 @@ body {
margin-right: -10px;
}
.dropdown-submenu:hover>a:after {
border-left-color: #ffffff;
border-left-color: #adb5bd;
}
.dropdown-submenu.pull-left {
float: none;
@ -184,7 +131,7 @@ body {
}
</style>
<script>
<script type="text/javascript">
// manage active state of menu based on current page
$(document).ready(function () {
// active menu anchor
@ -195,10 +142,23 @@ $(document).ready(function () {
var menuAnchor = $('a[href="' + href + '"]');
// mark it active
menuAnchor.parent().addClass('active');
menuAnchor.tab('show');
// if it's got a parent navbar menu mark it active as well
menuAnchor.closest('li.dropdown').addClass('active');
// Navbar adjustments
var navHeight = $(".navbar").first().height() + 15;
var style = document.createElement('style');
var pt = "padding-top: " + navHeight + "px; ";
var mt = "margin-top: -" + navHeight + "px; ";
var css = "";
// offset scroll position for anchor links (for fixed navbar)
for (var i = 1; i <= 6; i++) {
css += ".section h" + i + "{ " + pt + mt + "}\n";
}
style.innerHTML = "body {" + pt + "padding-bottom: 40px; }\n" + css;
document.head.appendChild(style);
});
</script>
@ -210,7 +170,6 @@ $(document).ready(function () {
max-height: 500px;
min-height: 44px;
overflow-y: auto;
background: white;
border: 1px solid #ddd;
border-radius: 4px;
}
@ -288,13 +247,13 @@ $(document).ready(function () {
<ul class="nav navbar-nav">
<li>
<a href="index.html">
<span class="fas fa-home"></span>
<span class="fa fa-home"></span>
</a>
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-landmark"></span>
<span class="fa fa-landmark"></span>
Background
@ -314,7 +273,7 @@ $(document).ready(function () {
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-list-alt"></span>
<span class="fa fa-list-alt"></span>
Conventions
@ -334,7 +293,7 @@ $(document).ready(function () {
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-history"></span>
<span class="fa fa-history"></span>
CDM Versions
@ -365,7 +324,7 @@ $(document).ready(function () {
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-plus-square"></span>
<span class="fa fa-plus-square"></span>
Proposals
@ -387,7 +346,7 @@ $(document).ready(function () {
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-question"></span>
<span class="fa fa-question"></span>
How to
@ -407,7 +366,7 @@ $(document).ready(function () {
</li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
<span class="fas fa-life-ring"></span>
<span class="fa fa-life-ring"></span>
Support
@ -429,7 +388,7 @@ $(document).ready(function () {
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/OHDSI/CommonDataModel">
<span class="fas fa-github"></span>
<span class="fa fa-github"></span>
</a>
</li>
@ -438,7 +397,7 @@ $(document).ready(function () {
</div><!--/.container -->
</div><!--/.navbar -->
<div class="fluid-row" id="header">
<div id="header">
@ -455,10 +414,10 @@ $(document).ready(function () {
<h2>Current CDM Version</h2>
<p>The current CDM version is <a href="http://ohdsi.github.io/CommonDataModel/cdm54.html">CDM v5.4</a>, depicted below. This CDM version was developed over the course of a year by considering requests that were sent via our <a href="https://github.com/OHDSI/CommonDataModel/issues">issues page</a>. The list of proposed changes was then shared with the community in multiple ways: through discussions at the weekly OHDSI Community calls, discussions with the OHDSI Steering Committee, and discussions with all potentially affected workgroups. The <a href="http://ohdsi.github.io/CommonDataModel/cdm54Changes.html">final changes</a> were then delivered to the Community through a new R package designed to dynamically generate the DDLs and documentation for all supported SQL dialects.</p>
<ul>
<li><a href="https://github.com/OHDSI/CommonDataModel/tree/v5.4.0">Link to DDLs for CDM v5.4</a></li>
<li><a href="https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4">Link to DDLs for CDM v5.4</a></li>
<li><a href="https://github.com/OHDSI/CommonDataModel/tree/master#readme">Link to ReadMe for instructions on how to use the R package</a></li>
</ul>
<p><img src="images/cdm54.png" /> <br></p>
<p><img src="images/cdm54.png" /></p>
</div>
<div id="the-cdm-working-group" class="section level2">
<h2>The CDM Working Group</h2>
@ -508,7 +467,7 @@ $(document).ready(function () {
$(document).ready(function () {
$('.tabset-dropdown > .nav-tabs > li').click(function () {
$(this).parent().toggleClass('nav-tabs-open')
$(this).parent().toggleClass('nav-tabs-open');
});
});
</script>

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rmd/index.Rmd
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@ -11,11 +11,10 @@ This website is meant to serve as a resource describing the specification of the
The current CDM version is [CDM v5.4](http://ohdsi.github.io/CommonDataModel/cdm54.html), depicted below. This CDM version was developed over the course of a year by considering requests that were sent via our [issues page](https://github.com/OHDSI/CommonDataModel/issues). The list of proposed changes was then shared with the community in multiple ways: through discussions at the weekly OHDSI Community calls, discussions with the OHDSI Steering Committee, and discussions with all potentially affected workgroups. The [final changes](http://ohdsi.github.io/CommonDataModel/cdm54Changes.html) were then delivered to the Community through a new R package designed to dynamically generate the DDLs and documentation for all supported SQL dialects.
- [Link to DDLs for CDM v5.4](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0)
- [Link to DDLs for CDM v5.4](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4)
- [Link to ReadMe for instructions on how to use the R package](https://github.com/OHDSI/CommonDataModel/tree/master#readme)
![](images/cdm54.png)
<br>
## The CDM Working Group