Adds link directly to DDLs

Closes #471

README.md

@@ -10,6 +10,8 @@ output:
 
 # How to Use this Repository
 
+If you are looking for the SQL DDLs and don't wish to generate them through R, they can be accessed [here](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4).
+
 If you are looking for information on how to submit a bugfix, skip to the [next section](https://github.com/OHDSI/CommonDataModel#bug-fixesmodel-updates)
 
 ## Generating the DDLs

docs/index.html

@@ -11,15 +11,24 @@
 
 
 
-<title>index.utf8</title>
+<title>index.knit</title>
 
-<script src="site_libs/header-attrs-2.6/header-attrs.js"></script>
+<script src="site_libs/header-attrs-2.11/header-attrs.js"></script>
-<script src="site_libs/jquery-1.11.3/jquery.min.js"></script>
+<script src="site_libs/jquery-3.6.0/jquery-3.6.0.min.js"></script>
 <meta name="viewport" content="width=device-width, initial-scale=1" />
 <link href="site_libs/bootstrap-3.3.5/css/cosmo.min.css" rel="stylesheet" />
 <script src="site_libs/bootstrap-3.3.5/js/bootstrap.min.js"></script>
 <script src="site_libs/bootstrap-3.3.5/shim/html5shiv.min.js"></script>
 <script src="site_libs/bootstrap-3.3.5/shim/respond.min.js"></script>
+<style>h1 {font-size: 34px;}
+       h1.title {font-size: 38px;}
+       h2 {font-size: 30px;}
+       h3 {font-size: 24px;}
+       h4 {font-size: 18px;}
+       h5 {font-size: 16px;}
+       h6 {font-size: 12px;}
+       code {color: inherit; background-color: rgba(0, 0, 0, 0.04);}
+       pre:not([class]) { background-color: white }</style>
 <script src="site_libs/navigation-1.1/tabsets.js"></script>
 <link href="site_libs/highlightjs-9.12.0/default.css" rel="stylesheet" />
 <script src="site_libs/highlightjs-9.12.0/highlight.js"></script>
@@ -37,11 +46,6 @@
     </style>
 
 <style type="text/css">code{white-space: pre;}</style>
-<style type="text/css">
-  pre:not([class]) {
-    background-color: white;
-  }
-</style>
 <script type="text/javascript">
 if (window.hljs) {
   hljs.configure({languages: []});
@@ -54,32 +58,6 @@ if (window.hljs) {
 
 
 
-<style type="text/css">
-h1 {
-  font-size: 34px;
-}
-h1.title {
-  font-size: 38px;
-}
-h2 {
-  font-size: 30px;
-}
-h3 {
-  font-size: 24px;
-}
-h4 {
-  font-size: 18px;
-}
-h5 {
-  font-size: 16px;
-}
-h6 {
-  font-size: 12px;
-}
-.table th:not([align]) {
-  text-align: left;
-}
-</style>
 
 
 <link rel="stylesheet" href="style.css" type="text/css" />
@@ -92,10 +70,6 @@ h6 {
   margin-left: auto;
   margin-right: auto;
 }
-code {
-  color: inherit;
-  background-color: rgba(0, 0, 0, 0.04);
-}
 img {
   max-width:100%;
 }
@@ -111,40 +85,13 @@ button.code-folding-btn:focus {
 summary {
   display: list-item;
 }
+pre code {
+  padding: 0;
+}
 </style>
 
 
 <style type="text/css">
-/* padding for bootstrap navbar */
-body {
-  padding-top: 51px;
-  padding-bottom: 40px;
-}
-/* offset scroll position for anchor links (for fixed navbar)  */
-.section h1 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
-.section h2 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
-.section h3 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
-.section h4 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
-.section h5 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
-.section h6 {
-  padding-top: 56px;
-  margin-top: -56px;
-}
 .dropdown-submenu {
   position: relative;
 }
@@ -172,7 +119,7 @@ body {
   margin-right: -10px;
 }
 .dropdown-submenu:hover>a:after {
-  border-left-color: #ffffff;
+  border-left-color: #adb5bd;
 }
 .dropdown-submenu.pull-left {
   float: none;
@@ -184,7 +131,7 @@ body {
 }
 </style>
 
-<script>
+<script type="text/javascript">
 // manage active state of menu based on current page
 $(document).ready(function () {
   // active menu anchor
@@ -195,10 +142,23 @@ $(document).ready(function () {
   var menuAnchor = $('a[href="' + href + '"]');
 
   // mark it active
-  menuAnchor.parent().addClass('active');
+  menuAnchor.tab('show');
 
   // if it's got a parent navbar menu mark it active as well
   menuAnchor.closest('li.dropdown').addClass('active');
+
+  // Navbar adjustments
+  var navHeight = $(".navbar").first().height() + 15;
+  var style = document.createElement('style');
+  var pt = "padding-top: " + navHeight + "px; ";
+  var mt = "margin-top: -" + navHeight + "px; ";
+  var css = "";
+  // offset scroll position for anchor links (for fixed navbar)
+  for (var i = 1; i <= 6; i++) {
+    css += ".section h" + i + "{ " + pt + mt + "}\n";
+  }
+  style.innerHTML = "body {" + pt + "padding-bottom: 40px; }\n" + css;
+  document.head.appendChild(style);
 });
 </script>
 
@@ -210,7 +170,6 @@ $(document).ready(function () {
   max-height: 500px;
   min-height: 44px;
   overflow-y: auto;
-  background: white;
   border: 1px solid #ddd;
   border-radius: 4px;
 }
@@ -288,13 +247,13 @@ $(document).ready(function () {
       <ul class="nav navbar-nav">
         <li>
   <a href="index.html">
-    <span class="fas fa-home"></span>
+    <span class="fa fa-home"></span>
      
   </a>
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-landmark"></span>
+    <span class="fa fa-landmark"></span>
      
     Background
      
@@ -314,7 +273,7 @@ $(document).ready(function () {
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-list-alt"></span>
+    <span class="fa fa-list-alt"></span>
      
     Conventions
      
@@ -334,7 +293,7 @@ $(document).ready(function () {
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-history"></span>
+    <span class="fa fa-history"></span>
      
     CDM Versions
      
@@ -365,7 +324,7 @@ $(document).ready(function () {
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-plus-square"></span>
+    <span class="fa fa-plus-square"></span>
      
     Proposals
      
@@ -387,7 +346,7 @@ $(document).ready(function () {
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-question"></span>
+    <span class="fa fa-question"></span>
      
     How to
      
@@ -407,7 +366,7 @@ $(document).ready(function () {
 </li>
 <li class="dropdown">
   <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">
-    <span class="fas fa-life-ring"></span>
+    <span class="fa fa-life-ring"></span>
      
     Support
      
@@ -429,7 +388,7 @@ $(document).ready(function () {
       <ul class="nav navbar-nav navbar-right">
         <li>
   <a href="https://github.com/OHDSI/CommonDataModel">
-    <span class="fas fa-github"></span>
+    <span class="fa fa-github"></span>
      
   </a>
 </li>
@@ -438,7 +397,7 @@ $(document).ready(function () {
   </div><!--/.container -->
 </div><!--/.navbar -->
 
-<div class="fluid-row" id="header">
+<div id="header">
 
 
 
@@ -455,10 +414,10 @@ $(document).ready(function () {
 <h2>Current CDM Version</h2>
 <p>The current CDM version is <a href="http://ohdsi.github.io/CommonDataModel/cdm54.html">CDM v5.4</a>, depicted below. This CDM version was developed over the course of a year by considering requests that were sent via our <a href="https://github.com/OHDSI/CommonDataModel/issues">issues page</a>. The list of proposed changes was then shared with the community in multiple ways: through discussions at the weekly OHDSI Community calls, discussions with the OHDSI Steering Committee, and discussions with all potentially affected workgroups. The <a href="http://ohdsi.github.io/CommonDataModel/cdm54Changes.html">final changes</a> were then delivered to the Community through a new R package designed to dynamically generate the DDLs and documentation for all supported SQL dialects.</p>
 <ul>
-<li><a href="https://github.com/OHDSI/CommonDataModel/tree/v5.4.0">Link to DDLs for CDM v5.4</a></li>
+<li><a href="https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4">Link to DDLs for CDM v5.4</a></li>
 <li><a href="https://github.com/OHDSI/CommonDataModel/tree/master#readme">Link to ReadMe for instructions on how to use the R package</a></li>
 </ul>
-<p><img src="images/cdm54.png" /> <br></p>
+<p><img src="images/cdm54.png" /></p>
 </div>
 <div id="the-cdm-working-group" class="section level2">
 <h2>The CDM Working Group</h2>
@@ -508,7 +467,7 @@ $(document).ready(function () {
 
 $(document).ready(function () {
   $('.tabset-dropdown > .nav-tabs > li').click(function () {
-    $(this).parent().toggleClass('nav-tabs-open')
+    $(this).parent().toggleClass('nav-tabs-open');
   });
 });
 </script>

rmd/index.Rmd

@@ -11,11 +11,10 @@ This website is meant to serve as a resource describing the specification of the
 
 The current CDM version is [CDM v5.4](http://ohdsi.github.io/CommonDataModel/cdm54.html), depicted below. This CDM version was developed over the course of a year by considering requests that were sent via our [issues page](https://github.com/OHDSI/CommonDataModel/issues). The list of proposed changes was then shared with the community in multiple ways: through discussions at the weekly OHDSI Community calls, discussions with the OHDSI Steering Committee, and discussions with all potentially affected workgroups. The [final changes](http://ohdsi.github.io/CommonDataModel/cdm54Changes.html) were then delivered to the Community through a new R package designed to dynamically generate the DDLs and documentation for all supported SQL dialects. 
 
-- [Link to DDLs for CDM v5.4](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0)
+- [Link to DDLs for CDM v5.4](https://github.com/OHDSI/CommonDataModel/tree/v5.4.0/inst/ddl/5.4)
 - [Link to ReadMe for instructions on how to use the R package](https://github.com/OHDSI/CommonDataModel/tree/master#readme)
 
 ![](images/cdm54.png)
-<br>
 
 ## The CDM Working Group