Adam Black
|
532be98c0c
|
Add unit tests for all databases and DDLs (#431)
* Add github actions workflow to build package and run tests.
* update Description file
* rename .Rproj file.
* Consolidate 'create' functions into one file.
* Add tests for create functions.
* update description
* removed spaces in file and folder names. Regenerated ddl output. Tried to fix Field_Level.csv file.
* consolidate write functions into one file. Add execute function.
* update docs
* add tests for write and execute functions
* update documentation
* Add windows and linux runners in github actions.
* update github actions
* download drivers before running tests
* fix small error in setup test file.
* debug github actions
* debug github actions
* debug github actions
* debug github actions
* fix tiny bug
* comment out execute ddl test
* fix bug in test
* Add execute test back in
* revert accidental change in description
* add print statement for debugging schema error on github actions.
* Fix schema environment variable name
* Add comment to github actions workflow file.
* remove placeholder text in function documentation.
* Rename createdDdl.R to createDdl.R
* Hack-a-thon updates
Closes #81, #387, #239, #412, #391, #330, #408, #365, #306, #264
* Changed bigint to integer for consistency
* Updated DDLs
* Add tests for redshift. Clean up test setup file.
* Foreign key fixes
* Add imports and update docs.
* Fix bug in setup test script.
* update setup file
* Add tests for oracle and sql server. Move setup.R file.
* fix bug in setup
* debug tests on github
* debug github actions
* debug actions.
* debug actions
* debug actions.
* Add missing secrets to yaml!!
* debug actions
* test connection on all platforms
* add ddl execution
* add windows and linux runners
Co-authored-by: Adam Black <adam.black@odysseusinc.com>
Co-authored-by: Clair Blacketer <mblacke@its.jnj.com>
|
2021-08-20 07:59:29 -04:00 |
Alan Andryc
|
d73a0f426d
|
Merge branch 'v5.4' into v5.4
|
2021-08-19 13:30:50 -04:00 |
Andryc
|
7036b0e0f3
|
resolving merge issue on field level csv
|
2021-08-19 13:14:23 -04:00 |
Clair Blacketer
|
c9463d0cf1
|
Adding EPISODE and EPISODE event tables
|
2021-08-19 12:58:41 -04:00 |
|
Clair Blacketer
|
a2812b85e5
|
Added EPISODE and EPISODE_EVENT tables to table_level_5.4
Also update the oncology extension documents to align with the table level file for v5.4
|
2021-08-19 12:45:44 -04:00 |
clairblacketer
|
b17ca8a856
|
Merge branch 'v5.4' into v5.4
|
2021-08-18 13:52:15 -04:00 |
|
clairblacketer
|
efc286e738
|
Merge branch 'v5.4' into v5.4
|
2021-08-18 13:47:13 -04:00 |
|
Andryc
|
3e17ee1715
|
Merge branch 'v5.4' of https://github.com/aandryc/CommonDataModel
Updating local branch to reflect changes made by team.
|
2021-08-18 13:36:21 -04:00 |
|
Alan Andryc
|
73a62ce122
|
Merge branch 'OHDSI:v5.4' into v5.4
|
2021-08-18 13:36:01 -04:00 |
Lisa Schilling
|
8dc0432f02
|
Update OMOP_CDMv5.4_Field_Level.csv
Addresses #418
|
2021-08-18 10:40:04 -06:00 |
Elizabeth Betts
|
7bc145ca0c
|
Update OMOP_CDMv5.4_Field_Level.csv
|
2021-08-18 17:39:38 +01:00 |
|
Elizabeth Betts
|
0f4f17f937
|
Update OMOP_CDMv5.4_Field_Level.csv
Issue #382
|
2021-08-18 17:22:52 +01:00 |
stephanieshong
|
4f1a5af4ae
|
issue 193 - Added value_source_value column to the Observation Table.
|
2021-08-18 12:21:52 -04:00 |
|
Andryc
|
2c3c42fb1c
|
update to metadata table - issue 202
|
2021-08-18 12:19:04 -04:00 |
|
Lisa Schilling
|
26018caea2
|
Update OMOP_CDMv5.4_Field_Level.csv
Addresses #386
|
2021-08-18 10:07:58 -06:00 |
|
Andryc
|
41bda9c907
|
Issue 329 updated visit_detail_parent_id
|
2021-08-18 11:27:56 -04:00 |
|
Clair Blacketer
|
0f1d9333dd
|
Adding v5.4 field level file
|
2021-07-20 13:59:23 -04:00 |