--iris CDM DDL Specification for OMOP Common Data Model 5.3 --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.person ( person_id integer NOT NULL, gender_concept_id integer NOT NULL, year_of_birth integer NOT NULL, month_of_birth integer NULL, day_of_birth integer NULL, birth_datetime datetime NULL, race_concept_id integer NOT NULL, ethnicity_concept_id integer NOT NULL, location_id integer NULL, provider_id integer NULL, care_site_id integer NULL, person_source_value varchar(50) NULL, gender_source_value varchar(50) NULL, gender_source_concept_id integer NULL, race_source_value varchar(50) NULL, race_source_concept_id integer NULL, ethnicity_source_value varchar(50) NULL, ethnicity_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.observation_period ( observation_period_id integer NOT NULL, person_id integer NOT NULL, observation_period_start_date date NOT NULL, observation_period_end_date date NOT NULL, period_type_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.visit_occurrence ( visit_occurrence_id integer NOT NULL, person_id integer NOT NULL, visit_concept_id integer NOT NULL, visit_start_date date NOT NULL, visit_start_datetime datetime NULL, visit_end_date date NOT NULL, visit_end_datetime datetime NULL, visit_type_concept_id Integer NOT NULL, provider_id integer NULL, care_site_id integer NULL, visit_source_value varchar(50) NULL, visit_source_concept_id integer NULL, admitting_source_concept_id integer NULL, admitting_source_value varchar(50) NULL, discharge_to_concept_id integer NULL, discharge_to_source_value varchar(50) NULL, preceding_visit_occurrence_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.visit_detail ( visit_detail_id integer NOT NULL, person_id integer NOT NULL, visit_detail_concept_id integer NOT NULL, visit_detail_start_date date NOT NULL, visit_detail_start_datetime datetime NULL, visit_detail_end_date date NOT NULL, visit_detail_end_datetime datetime NULL, visit_detail_type_concept_id integer NOT NULL, provider_id integer NULL, care_site_id integer NULL, visit_detail_source_value varchar(50) NULL, visit_detail_source_concept_id Integer NULL, admitting_source_value Varchar(50) NULL, admitting_source_concept_id Integer NULL, discharge_to_source_value Varchar(50) NULL, discharge_to_concept_id integer NULL, preceding_visit_detail_id integer NULL, visit_detail_parent_id integer NULL, visit_occurrence_id integer NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.condition_occurrence ( condition_occurrence_id integer NOT NULL, person_id integer NOT NULL, condition_concept_id integer NOT NULL, condition_start_date date NOT NULL, condition_start_datetime datetime NULL, condition_end_date date NULL, condition_end_datetime datetime NULL, condition_type_concept_id integer NOT NULL, condition_status_concept_id integer NULL, stop_reason varchar(20) NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, condition_source_value varchar(50) NULL, condition_source_concept_id integer NULL, condition_status_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.drug_exposure ( drug_exposure_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, drug_exposure_start_date date NOT NULL, drug_exposure_start_datetime datetime NULL, drug_exposure_end_date date NOT NULL, drug_exposure_end_datetime datetime NULL, verbatim_end_date date NULL, drug_type_concept_id integer NOT NULL, stop_reason varchar(20) NULL, refills integer NULL, quantity float NULL, days_supply integer NULL, sig varchar(MAX) NULL, route_concept_id integer NULL, lot_number varchar(50) NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, drug_source_value varchar(50) NULL, drug_source_concept_id integer NULL, route_source_value varchar(50) NULL, dose_unit_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.procedure_occurrence ( procedure_occurrence_id integer NOT NULL, person_id integer NOT NULL, procedure_concept_id integer NOT NULL, procedure_date date NOT NULL, procedure_datetime datetime NULL, procedure_type_concept_id integer NOT NULL, modifier_concept_id integer NULL, quantity integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, procedure_source_value varchar(50) NULL, procedure_source_concept_id integer NULL, modifier_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.device_exposure ( device_exposure_id integer NOT NULL, person_id integer NOT NULL, device_concept_id integer NOT NULL, device_exposure_start_date date NOT NULL, device_exposure_start_datetime datetime NULL, device_exposure_end_date date NULL, device_exposure_end_datetime datetime NULL, device_type_concept_id integer NOT NULL, unique_device_id varchar(50) NULL, quantity integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, device_source_value varchar(50) NULL, device_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.measurement ( measurement_id integer NOT NULL, person_id integer NOT NULL, measurement_concept_id integer NOT NULL, measurement_date date NOT NULL, measurement_datetime datetime NULL, measurement_time varchar(10) NULL, measurement_type_concept_id integer NOT NULL, operator_concept_id integer NULL, value_as_number float NULL, value_as_concept_id integer NULL, unit_concept_id integer NULL, range_low float NULL, range_high float NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, measurement_source_value varchar(50) NULL, measurement_source_concept_id integer NULL, unit_source_value varchar(50) NULL, value_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.observation ( observation_id integer NOT NULL, person_id integer NOT NULL, observation_concept_id integer NOT NULL, observation_date date NOT NULL, observation_datetime datetime NULL, observation_type_concept_id integer NOT NULL, value_as_number float NULL, value_as_string varchar(60) NULL, value_as_concept_id Integer NULL, qualifier_concept_id integer NULL, unit_concept_id integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, observation_source_value varchar(50) NULL, observation_source_concept_id integer NULL, unit_source_value varchar(50) NULL, qualifier_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.death ( person_id integer NOT NULL, death_date date NOT NULL, death_datetime datetime NULL, death_type_concept_id integer NULL, cause_concept_id integer NULL, cause_source_value varchar(50) NULL, cause_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.note ( note_id integer NOT NULL, person_id integer NOT NULL, note_date date NOT NULL, note_datetime datetime NULL, note_type_concept_id integer NOT NULL, note_class_concept_id integer NOT NULL, note_title varchar(250) NULL, note_text varchar(MAX) NOT NULL, encoding_concept_id integer NOT NULL, language_concept_id integer NOT NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, note_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.note_nlp ( note_nlp_id integer NOT NULL, note_id integer NOT NULL, section_concept_id integer NULL, snippet varchar(250) NULL, "offset" varchar(50) NULL, lexical_variant varchar(250) NOT NULL, note_nlp_concept_id integer NULL, note_nlp_source_concept_id integer NULL, nlp_system varchar(250) NULL, nlp_date date NOT NULL, nlp_datetime datetime NULL, term_exists varchar(1) NULL, term_temporal varchar(50) NULL, term_modifiers varchar(2000) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.specimen ( specimen_id integer NOT NULL, person_id integer NOT NULL, specimen_concept_id integer NOT NULL, specimen_type_concept_id integer NOT NULL, specimen_date date NOT NULL, specimen_datetime datetime NULL, quantity float NULL, unit_concept_id integer NULL, anatomic_site_concept_id integer NULL, disease_status_concept_id integer NULL, specimen_source_id varchar(50) NULL, specimen_source_value varchar(50) NULL, unit_source_value varchar(50) NULL, anatomic_site_source_value varchar(50) NULL, disease_status_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.fact_relationship ( domain_concept_id_1 integer NOT NULL, fact_id_1 integer NOT NULL, domain_concept_id_2 integer NOT NULL, fact_id_2 integer NOT NULL, relationship_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.location ( location_id integer NOT NULL, address_1 varchar(50) NULL, address_2 varchar(50) NULL, city varchar(50) NULL, state varchar(2) NULL, zip varchar(9) NULL, county varchar(20) NULL, location_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.care_site ( care_site_id integer NOT NULL, care_site_name varchar(255) NULL, place_of_service_concept_id integer NULL, location_id integer NULL, care_site_source_value varchar(50) NULL, place_of_service_source_value varchar(50) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.provider ( provider_id integer NOT NULL, provider_name varchar(255) NULL, npi varchar(20) NULL, dea varchar(20) NULL, specialty_concept_id integer NULL, care_site_id integer NULL, year_of_birth integer NULL, gender_concept_id integer NULL, provider_source_value varchar(50) NULL, specialty_source_value varchar(50) NULL, specialty_source_concept_id integer NULL, gender_source_value varchar(50) NULL, gender_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.payer_plan_period ( payer_plan_period_id integer NOT NULL, person_id integer NOT NULL, payer_plan_period_start_date date NOT NULL, payer_plan_period_end_date date NOT NULL, payer_concept_id integer NULL, payer_source_value varchar(50) NULL, payer_source_concept_id integer NULL, plan_concept_id integer NULL, plan_source_value varchar(50) NULL, plan_source_concept_id integer NULL, sponsor_concept_id integer NULL, sponsor_source_value varchar(50) NULL, sponsor_source_concept_id integer NULL, family_source_value varchar(50) NULL, stop_reason_concept_id integer NULL, stop_reason_source_value varchar(50) NULL, stop_reason_source_concept_id integer NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.cost ( cost_id integer NOT NULL, cost_event_id integer NOT NULL, cost_domain_id varchar(20) NOT NULL, cost_type_concept_id integer NOT NULL, currency_concept_id integer NULL, total_charge float NULL, total_cost float NULL, total_paid float NULL, paid_by_payer float NULL, paid_by_patient float NULL, paid_patient_copay float NULL, paid_patient_coinsurance float NULL, paid_patient_deductible float NULL, paid_by_primary float NULL, paid_ingredient_cost float NULL, paid_dispensing_fee float NULL, payer_plan_period_id integer NULL, amount_allowed float NULL, revenue_code_concept_id integer NULL, revenue_code_source_value varchar(50) NULL, drg_concept_id integer NULL, drg_source_value varchar(3) NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.drug_era ( drug_era_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, drug_era_start_date date NOT NULL, drug_era_end_date date NOT NULL, drug_exposure_count integer NULL, gap_days integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.dose_era ( dose_era_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, unit_concept_id integer NOT NULL, dose_value float NOT NULL, dose_era_start_date date NOT NULL, dose_era_end_date date NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.condition_era ( condition_era_id integer NOT NULL, person_id integer NOT NULL, condition_concept_id integer NOT NULL, condition_era_start_date date NOT NULL, condition_era_end_date date NOT NULL, condition_occurrence_count integer NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.metadata ( metadata_concept_id integer NOT NULL, metadata_type_concept_id integer NOT NULL, name varchar(250) NOT NULL, value_as_string varchar(250) NULL, value_as_concept_id integer NULL, metadata_date date NULL, metadata_datetime datetime NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.cdm_source ( cdm_source_name varchar(255) NOT NULL, cdm_source_abbreviation varchar(25) NULL, cdm_holder varchar(255) NULL, source_description varchar(MAX) NULL, source_documentation_reference varchar(255) NULL, cdm_etl_reference varchar(255) NULL, source_release_date date NULL, cdm_release_date date NULL, cdm_version varchar(10) NULL, vocabulary_version varchar(20) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.concept ( concept_id integer NOT NULL, concept_name varchar(255) NOT NULL, domain_id varchar(20) NOT NULL, vocabulary_id varchar(20) NOT NULL, concept_class_id varchar(20) NOT NULL, standard_concept varchar(1) NULL, concept_code varchar(50) NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason varchar(1) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.vocabulary ( vocabulary_id varchar(20) NOT NULL, vocabulary_name varchar(255) NOT NULL, vocabulary_reference varchar(255) NOT NULL, vocabulary_version varchar(255) NULL, vocabulary_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema."DOMAIN" ( domain_id varchar(20) NOT NULL, domain_name varchar(255) NOT NULL, domain_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.concept_class ( concept_class_id varchar(20) NOT NULL, concept_class_name varchar(255) NOT NULL, concept_class_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.concept_relationship ( concept_id_1 integer NOT NULL, concept_id_2 integer NOT NULL, relationship_id varchar(20) NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason varchar(1) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.relationship ( relationship_id varchar(20) NOT NULL, relationship_name varchar(255) NOT NULL, is_hierarchical varchar(1) NOT NULL, defines_ancestry varchar(1) NOT NULL, reverse_relationship_id varchar(20) NOT NULL, relationship_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.concept_synonym ( concept_id integer NOT NULL, concept_synonym_name varchar(1000) NOT NULL, language_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.concept_ancestor ( ancestor_concept_id integer NOT NULL, descendant_concept_id integer NOT NULL, min_levels_of_separation integer NOT NULL, max_levels_of_separation integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.source_to_concept_map ( source_code varchar(50) NOT NULL, source_concept_id integer NOT NULL, source_vocabulary_id varchar(20) NOT NULL, source_code_description varchar(255) NULL, target_concept_id integer NOT NULL, target_vocabulary_id varchar(20) NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason varchar(1) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.drug_strength ( drug_concept_id integer NOT NULL, ingredient_concept_id integer NOT NULL, amount_value float NULL, amount_unit_concept_id integer NULL, numerator_value float NULL, numerator_unit_concept_id integer NULL, denominator_value float NULL, denominator_unit_concept_id integer NULL, box_size integer NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason varchar(1) NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.cohort_definition ( cohort_definition_id integer NOT NULL, cohort_definition_name varchar(255) NOT NULL, cohort_definition_description varchar(MAX) NULL, definition_type_concept_id integer NOT NULL, cohort_definition_syntax varchar(MAX) NULL, subject_concept_id integer NOT NULL, cohort_initiation_date date NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.attribute_definition ( attribute_definition_id integer NOT NULL, attribute_name varchar(255) NOT NULL, attribute_description varchar(MAX) NULL, attribute_type_concept_id integer NOT NULL, attribute_syntax varchar(MAX) NULL );