#This script is meant to create the OMOP Common Data Model DDLs for each dialect as well as the pdf of the documentation. # Step 1: Update the file inst/sql/sql_server/OMOP CDM ddl.sql with the changes for the new version and set the below variables # Step 1.1: The version of the CDM you are writing. This will be used for the name of the pdf so, for example, write v5.3 as v5_3 cdmVersion <- "v5_3" # Step 1.2: The location of the wiki markdown files. The default is "../../Documentation/CommonDataModel_Wiki_Files" mdFilesLocation <- "../../Documentation/CommonDataModel_Wiki_Files" # Step 2: Run the following code to create the DDLs for each dialect: writeDDL("bigquery") writeDDL("impala") writeDDL("netezza") writeDDL("oracle") writeDDL("pdw") writeDDL("postgresql") writeDDL("redshift") writeDDL("sql server") # Step 3: Run the following code to create the primary key constraints and index files for Oracle, Postgres, PDW and Sql Server writeIndex("oracle") writeIndex("postgresql") writeIndex("pdw") writeIndex("sql server") # Step 4: Run the following code to create foreign key constraints for Oracle, Postgres, PDW and Sql Server writeConstraints("oracle") writeConstraints("postgresql") writeConstraints("pdw") writeConstraints("sql server") # step 5: Run the following code to create the pdf documentation. It will be written to the reports folder. rmarkdown::render("reports/OMOP_CDM_PDF.Rmd", output_format = "pdf_document", output_file = paste0("OMOP_CDM_",cdmVersion,".pdf"), params = list(mdFilesLocation = mdFilesLocation))