--sqlite CDM DDL Specification for OMOP Common Data Model 5.3 --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.PERSON ( person_id integer NOT NULL, gender_concept_id integer NOT NULL, year_of_birth integer NOT NULL, month_of_birth integer NULL, day_of_birth integer NULL, birth_datetime REAL NULL, race_concept_id integer NOT NULL, ethnicity_concept_id integer NOT NULL, location_id integer NULL, provider_id integer NULL, care_site_id integer NULL, person_source_value TEXT NULL, gender_source_value TEXT NULL, gender_source_concept_id integer NULL, race_source_value TEXT NULL, race_source_concept_id integer NULL, ethnicity_source_value TEXT NULL, ethnicity_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.OBSERVATION_PERIOD ( observation_period_id integer NOT NULL, person_id integer NOT NULL, observation_period_start_date date NOT NULL, observation_period_end_date date NOT NULL, period_type_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.VISIT_OCCURRENCE ( visit_occurrence_id integer NOT NULL, person_id integer NOT NULL, visit_concept_id integer NOT NULL, visit_start_date date NOT NULL, visit_start_datetime REAL NULL, visit_end_date date NOT NULL, visit_end_datetime REAL NULL, visit_type_concept_id Integer NOT NULL, provider_id integer NULL, care_site_id integer NULL, visit_source_value TEXT NULL, visit_source_concept_id integer NULL, admitting_source_concept_id integer NULL, admitting_source_value TEXT NULL, discharge_to_concept_id integer NULL, discharge_to_source_value TEXT NULL, preceding_visit_occurrence_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.VISIT_DETAIL ( visit_detail_id integer NOT NULL, person_id integer NOT NULL, visit_detail_concept_id integer NOT NULL, visit_detail_start_date date NOT NULL, visit_detail_start_datetime REAL NULL, visit_detail_end_date date NOT NULL, visit_detail_end_datetime REAL NULL, visit_detail_type_concept_id integer NOT NULL, provider_id integer NULL, care_site_id integer NULL, visit_detail_source_value TEXT NULL, visit_detail_source_concept_id Integer NULL, admitting_source_value TEXT NULL, admitting_source_concept_id Integer NULL, discharge_to_source_value TEXT NULL, discharge_to_concept_id integer NULL, preceding_visit_detail_id integer NULL, visit_detail_parent_id integer NULL, visit_occurrence_id integer NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.CONDITION_OCCURRENCE ( condition_occurrence_id integer NOT NULL, person_id integer NOT NULL, condition_concept_id integer NOT NULL, condition_start_date date NOT NULL, condition_start_datetime REAL NULL, condition_end_date date NULL, condition_end_datetime REAL NULL, condition_type_concept_id integer NOT NULL, condition_status_concept_id integer NULL, stop_reason TEXT NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, condition_source_value TEXT NULL, condition_source_concept_id integer NULL, condition_status_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.DRUG_EXPOSURE ( drug_exposure_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, drug_exposure_start_date date NOT NULL, drug_exposure_start_datetime REAL NULL, drug_exposure_end_date date NOT NULL, drug_exposure_end_datetime REAL NULL, verbatim_end_date date NULL, drug_type_concept_id integer NOT NULL, stop_reason TEXT NULL, refills integer NULL, quantity REAL NULL, days_supply integer NULL, sig TEXT NULL, route_concept_id integer NULL, lot_number TEXT NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, drug_source_value TEXT NULL, drug_source_concept_id integer NULL, route_source_value TEXT NULL, dose_unit_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.PROCEDURE_OCCURRENCE ( procedure_occurrence_id integer NOT NULL, person_id integer NOT NULL, procedure_concept_id integer NOT NULL, procedure_date date NOT NULL, procedure_datetime REAL NULL, procedure_type_concept_id integer NOT NULL, modifier_concept_id integer NULL, quantity integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, procedure_source_value TEXT NULL, procedure_source_concept_id integer NULL, modifier_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.DEVICE_EXPOSURE ( device_exposure_id integer NOT NULL, person_id integer NOT NULL, device_concept_id integer NOT NULL, device_exposure_start_date date NOT NULL, device_exposure_start_datetime REAL NULL, device_exposure_end_date date NULL, device_exposure_end_datetime REAL NULL, device_type_concept_id integer NOT NULL, unique_device_id TEXT NULL, quantity integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, device_source_value TEXT NULL, device_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.MEASUREMENT ( measurement_id integer NOT NULL, person_id integer NOT NULL, measurement_concept_id integer NOT NULL, measurement_date date NOT NULL, measurement_datetime REAL NULL, measurement_time TEXT NULL, measurement_type_concept_id integer NOT NULL, operator_concept_id integer NULL, value_as_number REAL NULL, value_as_concept_id integer NULL, unit_concept_id integer NULL, range_low REAL NULL, range_high REAL NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, measurement_source_value TEXT NULL, measurement_source_concept_id integer NULL, unit_source_value TEXT NULL, value_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.OBSERVATION ( observation_id integer NOT NULL, person_id integer NOT NULL, observation_concept_id integer NOT NULL, observation_date date NOT NULL, observation_datetime REAL NULL, observation_type_concept_id integer NOT NULL, value_as_number REAL NULL, value_as_string TEXT NULL, value_as_concept_id Integer NULL, qualifier_concept_id integer NULL, unit_concept_id integer NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, observation_source_value TEXT NULL, observation_source_concept_id integer NULL, unit_source_value TEXT NULL, qualifier_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.DEATH ( person_id integer NOT NULL, death_date date NOT NULL, death_datetime REAL NULL, death_type_concept_id integer NULL, cause_concept_id integer NULL, cause_source_value TEXT NULL, cause_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.NOTE ( note_id integer NOT NULL, person_id integer NOT NULL, note_date date NOT NULL, note_datetime REAL NULL, note_type_concept_id integer NOT NULL, note_class_concept_id integer NOT NULL, note_title TEXT NULL, note_text TEXT NOT NULL, encoding_concept_id integer NOT NULL, language_concept_id integer NOT NULL, provider_id integer NULL, visit_occurrence_id integer NULL, visit_detail_id integer NULL, note_source_value TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.NOTE_NLP ( note_nlp_id integer NOT NULL, note_id integer NOT NULL, section_concept_id integer NULL, snippet TEXT NULL, "offset" TEXT NULL, lexical_variant TEXT NOT NULL, note_nlp_concept_id integer NULL, note_nlp_source_concept_id integer NULL, nlp_system TEXT NULL, nlp_date date NOT NULL, nlp_datetime REAL NULL, term_exists TEXT NULL, term_temporal TEXT NULL, term_modifiers TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.SPECIMEN ( specimen_id integer NOT NULL, person_id integer NOT NULL, specimen_concept_id integer NOT NULL, specimen_type_concept_id integer NOT NULL, specimen_date date NOT NULL, specimen_datetime REAL NULL, quantity REAL NULL, unit_concept_id integer NULL, anatomic_site_concept_id integer NULL, disease_status_concept_id integer NULL, specimen_source_id TEXT NULL, specimen_source_value TEXT NULL, unit_source_value TEXT NULL, anatomic_site_source_value TEXT NULL, disease_status_source_value TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.FACT_RELATIONSHIP ( domain_concept_id_1 integer NOT NULL, fact_id_1 integer NOT NULL, domain_concept_id_2 integer NOT NULL, fact_id_2 integer NOT NULL, relationship_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.LOCATION ( location_id integer NOT NULL, address_1 TEXT NULL, address_2 TEXT NULL, city TEXT NULL, state TEXT NULL, zip TEXT NULL, county TEXT NULL, location_source_value TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CARE_SITE ( care_site_id integer NOT NULL, care_site_name TEXT NULL, place_of_service_concept_id integer NULL, location_id integer NULL, care_site_source_value TEXT NULL, place_of_service_source_value TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.PROVIDER ( provider_id integer NOT NULL, provider_name TEXT NULL, npi TEXT NULL, dea TEXT NULL, specialty_concept_id integer NULL, care_site_id integer NULL, year_of_birth integer NULL, gender_concept_id integer NULL, provider_source_value TEXT NULL, specialty_source_value TEXT NULL, specialty_source_concept_id integer NULL, gender_source_value TEXT NULL, gender_source_concept_id integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.PAYER_PLAN_PERIOD ( payer_plan_period_id integer NOT NULL, person_id integer NOT NULL, payer_plan_period_start_date date NOT NULL, payer_plan_period_end_date date NOT NULL, payer_concept_id integer NULL, payer_source_value TEXT NULL, payer_source_concept_id integer NULL, plan_concept_id integer NULL, plan_source_value TEXT NULL, plan_source_concept_id integer NULL, sponsor_concept_id integer NULL, sponsor_source_value TEXT NULL, sponsor_source_concept_id integer NULL, family_source_value TEXT NULL, stop_reason_concept_id integer NULL, stop_reason_source_value TEXT NULL, stop_reason_source_concept_id integer NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.COST ( cost_id integer NOT NULL, cost_event_id integer NOT NULL, cost_domain_id TEXT NOT NULL, cost_type_concept_id integer NOT NULL, currency_concept_id integer NULL, total_charge REAL NULL, total_cost REAL NULL, total_paid REAL NULL, paid_by_payer REAL NULL, paid_by_patient REAL NULL, paid_patient_copay REAL NULL, paid_patient_coinsurance REAL NULL, paid_patient_deductible REAL NULL, paid_by_primary REAL NULL, paid_ingredient_cost REAL NULL, paid_dispensing_fee REAL NULL, payer_plan_period_id integer NULL, amount_allowed REAL NULL, revenue_code_concept_id integer NULL, revenue_code_source_value TEXT NULL, drg_concept_id integer NULL, drg_source_value TEXT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.DRUG_ERA ( drug_era_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, drug_era_start_date date NOT NULL, drug_era_end_date date NOT NULL, drug_exposure_count integer NULL, gap_days integer NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.DOSE_ERA ( dose_era_id integer NOT NULL, person_id integer NOT NULL, drug_concept_id integer NOT NULL, unit_concept_id integer NOT NULL, dose_value REAL NOT NULL, dose_era_start_date date NOT NULL, dose_era_end_date date NOT NULL ); --HINT DISTRIBUTE ON KEY (person_id) CREATE TABLE @cdmDatabaseSchema.CONDITION_ERA ( condition_era_id integer NOT NULL, person_id integer NOT NULL, condition_concept_id integer NOT NULL, condition_era_start_date date NOT NULL, condition_era_end_date date NOT NULL, condition_occurrence_count integer NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.METADATA ( metadata_concept_id integer NOT NULL, metadata_type_concept_id integer NOT NULL, name TEXT NOT NULL, value_as_string TEXT NULL, value_as_concept_id integer NULL, metadata_date date NULL, metadata_datetime REAL NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CDM_SOURCE ( cdm_source_name TEXT NOT NULL, cdm_source_abbreviation TEXT NULL, cdm_holder TEXT NULL, source_description TEXT NULL, source_documentation_reference TEXT NULL, cdm_etl_reference TEXT NULL, source_release_date date NULL, cdm_release_date date NULL, cdm_version TEXT NULL, vocabulary_version TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CONCEPT ( concept_id integer NOT NULL, concept_name TEXT NOT NULL, domain_id TEXT NOT NULL, vocabulary_id TEXT NOT NULL, concept_class_id TEXT NOT NULL, standard_concept TEXT NULL, concept_code TEXT NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.VOCABULARY ( vocabulary_id TEXT NOT NULL, vocabulary_name TEXT NOT NULL, vocabulary_reference TEXT NOT NULL, vocabulary_version TEXT NULL, vocabulary_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.DOMAIN ( domain_id TEXT NOT NULL, domain_name TEXT NOT NULL, domain_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CONCEPT_CLASS ( concept_class_id TEXT NOT NULL, concept_class_name TEXT NOT NULL, concept_class_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CONCEPT_RELATIONSHIP ( concept_id_1 integer NOT NULL, concept_id_2 integer NOT NULL, relationship_id TEXT NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.RELATIONSHIP ( relationship_id TEXT NOT NULL, relationship_name TEXT NOT NULL, is_hierarchical TEXT NOT NULL, defines_ancestry TEXT NOT NULL, reverse_relationship_id TEXT NOT NULL, relationship_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CONCEPT_SYNONYM ( concept_id integer NOT NULL, concept_synonym_name TEXT NOT NULL, language_concept_id integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.CONCEPT_ANCESTOR ( ancestor_concept_id integer NOT NULL, descendant_concept_id integer NOT NULL, min_levels_of_separation integer NOT NULL, max_levels_of_separation integer NOT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.SOURCE_TO_CONCEPT_MAP ( source_code TEXT NOT NULL, source_concept_id integer NOT NULL, source_vocabulary_id TEXT NOT NULL, source_code_description TEXT NULL, target_concept_id integer NOT NULL, target_vocabulary_id TEXT NOT NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.DRUG_STRENGTH ( drug_concept_id integer NOT NULL, ingredient_concept_id integer NOT NULL, amount_value REAL NULL, amount_unit_concept_id integer NULL, numerator_value REAL NULL, numerator_unit_concept_id integer NULL, denominator_value REAL NULL, denominator_unit_concept_id integer NULL, box_size integer NULL, valid_start_date date NOT NULL, valid_end_date date NOT NULL, invalid_reason TEXT NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.COHORT_DEFINITION ( cohort_definition_id integer NOT NULL, cohort_definition_name TEXT NOT NULL, cohort_definition_description TEXT NULL, definition_type_concept_id integer NOT NULL, cohort_definition_syntax TEXT NULL, subject_concept_id integer NOT NULL, cohort_initiation_date date NULL ); --HINT DISTRIBUTE ON RANDOM CREATE TABLE @cdmDatabaseSchema.ATTRIBUTE_DEFINITION ( attribute_definition_id integer NOT NULL, attribute_name TEXT NOT NULL, attribute_description TEXT NULL, attribute_type_concept_id integer NOT NULL, attribute_syntax TEXT NULL );