47 lines
1.6 KiB
R
47 lines
1.6 KiB
R
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test_that("getConnectionDetails works", {
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for(dbms in testDatabases) {
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expect_s3_class(getConnectionDetails(dbms), "ConnectionDetails")
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}
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})
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test_that("getSchema works", {
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for(dbms in testDatabases) {
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expect_type(getSchema(dbms), "character")
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}
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})
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for(dbms in testDatabases) {
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connectionDetails <- getConnectionDetails(dbms)
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cdmDatabaseSchema <- getSchema(dbms)
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test_that(paste("Can connect to", dbms), {
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expect_error(con <- connect(connectionDetails), NA)
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expect_error(disconnect(con), NA)
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})
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for(cdmVersion in listSupportedVersions()) {
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test_that(paste("DDL", cdmVersion, "runs on", dbms), {
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dropAllTablesFromSchema(connectionDetails, cdmDatabaseSchema)
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tables <- listTablesInSchema(connectionDetails, cdmDatabaseSchema)
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expect_equal(tables, character(0))
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executeDdl(connectionDetails,
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cdmVersion = cdmVersion,
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cdmDatabaseSchema = cdmDatabaseSchema,
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executeDdl = TRUE,
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executePrimaryKey = TRUE,
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executeForeignKey = FALSE)
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tables <- listTablesInSchema(connectionDetails, cdmDatabaseSchema)
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cdmTableCsvLoc <- system.file(file.path("csv", paste0("OMOP_CDMv", cdmVersion, "_Table_Level.csv")), package = "CommonDataModel", mustWork = TRUE)
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tableSpecs <- read.csv(cdmTableCsvLoc, stringsAsFactors = FALSE)$cdmTableName
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# check that the tables in the database match the tables in the specification
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expect_equal(sort(tolower(tables)), sort(tolower(tableSpecs)))
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dropAllTablesFromSchema(connectionDetails, cdmDatabaseSchema)
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})
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}
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}
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