652 lines
20 KiB
Plaintext
652 lines
20 KiB
Plaintext
create table concept (
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concept_id INT64 not null ,
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concept_name STRING not null ,
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domain_id STRING not null ,
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vocabulary_id STRING not null ,
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concept_class_id STRING not null ,
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standard_concept STRING null ,
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concept_code STRING not null ,
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valid_start_DATE DATE not null ,
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valid_end_DATE DATE not null ,
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invalid_reason STRING null
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)
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;
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create table vocabulary (
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vocabulary_id STRING not null,
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vocabulary_name STRING not null,
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vocabulary_reference STRING not null,
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vocabulary_version STRING null,
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vocabulary_concept_id INT64 not null
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)
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;
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create table domain (
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domain_id STRING not null,
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domain_name STRING not null,
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domain_concept_id INT64 not null
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)
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;
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create table concept_class (
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concept_class_id STRING not null,
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concept_class_name STRING not null,
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concept_class_concept_id INT64 not null
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)
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;
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create table concept_relationship (
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concept_id_1 INT64 not null,
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concept_id_2 INT64 not null,
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relationship_id STRING not null,
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valid_start_DATE DATE not null,
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valid_end_DATE DATE not null,
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invalid_reason STRING null
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)
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;
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create table relationship (
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relationship_id STRING not null,
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relationship_name STRING not null,
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is_hierarchical STRING not null,
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defines_ancestry STRING not null,
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reverse_relationship_id STRING not null,
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relationship_concept_id INT64 not null
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)
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;
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create table concept_synonym (
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concept_id INT64 not null,
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concept_synonym_name STRING not null,
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language_concept_id INT64 not null
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)
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;
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create table concept_ancestor (
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ancestor_concept_id INT64 not null,
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descendant_concept_id INT64 not null,
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min_levels_of_separation INT64 not null,
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max_levels_of_separation INT64 not null
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)
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;
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create table source_to_concept_map (
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source_code STRING not null,
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source_concept_id INT64 not null,
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source_vocabulary_id STRING not null,
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source_code_description STRING null,
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target_concept_id INT64 not null,
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target_vocabulary_id STRING not null,
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valid_start_DATE DATE not null,
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valid_end_DATE DATE not null,
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invalid_reason STRING null
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)
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;
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create table drug_strength (
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drug_concept_id INT64 not null,
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ingredient_concept_id INT64 not null,
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amount_value FLOAT64 null,
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amount_unit_concept_id INT64 null,
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numerator_value FLOAT64 null,
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numerator_unit_concept_id INT64 null,
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denominator_value FLOAT64 null,
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denominator_unit_concept_id INT64 null,
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box_size INT64 null,
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valid_start_DATE DATE not null,
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valid_end_DATE DATE not null,
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invalid_reason STRING null
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)
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;
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create table cohort_definition (
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cohort_definition_id INT64 not null,
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cohort_definition_name STRING not null,
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cohort_definition_description STRING null,
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definition_type_concept_id INT64 not null,
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cohort_definition_syntax STRING null,
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subject_concept_id INT64 not null,
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cohort_initiation_DATE DATE null
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)
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;
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create table attribute_definition (
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attribute_definition_id INT64 not null,
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attribute_name STRING not null,
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attribute_description STRING null,
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attribute_type_concept_id INT64 not null,
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attribute_syntax STRING null
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)
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;
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create table cdm_source
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(
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cdm_source_name STRING not null ,
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cdm_source_abbreviation STRING null ,
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cdm_holder STRING null ,
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source_description STRING null ,
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source_documentation_reference STRING null ,
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cdm_etl_reference STRING null ,
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source_release_DATE DATE null ,
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cdm_release_DATE DATE null ,
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cdm_version STRING null ,
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vocabulary_version STRING null
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)
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;
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create table metadata
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(
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metadata_concept_id INT64 not null ,
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metadata_type_concept_id INT64 not null ,
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name STRING not null ,
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value_as_string STRING null ,
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value_as_concept_id INT64 null ,
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metadata_DATE DATE null ,
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metadata_DATETIME DATETIME null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table person
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(
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person_id INT64 not null ,
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gender_concept_id INT64 not null ,
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year_of_birth INT64 not null ,
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month_of_birth INT64 null,
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day_of_birth INT64 null,
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birth_DATETIME DATETIME null,
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race_concept_id INT64 not null,
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ethnicity_concept_id INT64 not null,
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location_id INT64 null,
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provider_id INT64 null,
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care_site_id INT64 null,
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person_source_value STRING null,
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gender_source_value STRING null,
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gender_source_concept_id INT64 null,
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race_source_value STRING null,
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race_source_concept_id INT64 null,
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ethnicity_source_value STRING null,
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ethnicity_source_concept_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table observation_period
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(
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observation_period_id INT64 not null ,
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person_id INT64 not null ,
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observation_period_start_DATE DATE not null ,
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observation_period_end_DATE DATE not null ,
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period_type_concept_id INT64 not null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table specimen
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(
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specimen_id INT64 not null ,
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person_id INT64 not null ,
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specimen_concept_id INT64 not null ,
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specimen_type_concept_id INT64 not null ,
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specimen_DATE DATE not null ,
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specimen_DATETIME DATETIME null ,
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quantity FLOAT64 null ,
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unit_concept_id INT64 null ,
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anatomic_site_concept_id INT64 null ,
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disease_status_concept_id INT64 null ,
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specimen_source_id STRING null ,
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specimen_source_value STRING null ,
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unit_source_value STRING null ,
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anatomic_site_source_value STRING null ,
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disease_status_source_value STRING null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table death
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(
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person_id INT64 not null ,
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death_DATE DATE not null ,
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death_DATETIME DATETIME null ,
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death_type_concept_id INT64 not null ,
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cause_concept_id INT64 null ,
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cause_source_value STRING null,
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cause_source_concept_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table visit_occurrence
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(
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visit_occurrence_id INT64 not null ,
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person_id INT64 not null ,
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visit_concept_id INT64 not null ,
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visit_start_DATE DATE not null ,
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visit_start_DATETIME DATETIME null ,
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visit_end_DATE DATE not null ,
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visit_end_DATETIME DATETIME null ,
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visit_type_concept_id INT64 not null ,
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provider_id INT64 null,
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care_site_id INT64 null,
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visit_source_value STRING null,
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visit_source_concept_id INT64 null ,
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admitting_source_concept_id INT64 null ,
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admitting_source_value STRING null ,
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discharge_to_concept_id INT64 null ,
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discharge_to_source_value STRING null ,
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preceding_visit_occurrence_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table visit_detail
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(
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visit_detail_id INT64 not null ,
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person_id INT64 not null ,
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visit_detail_concept_id INT64 not null ,
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visit_start_DATE DATE not null ,
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visit_start_DATETIME DATETIME null ,
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visit_end_DATE DATE not null ,
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visit_end_DATETIME DATETIME null ,
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visit_type_concept_id INT64 not null ,
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provider_id INT64 null ,
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care_site_id INT64 null ,
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admitting_source_concept_id INT64 null ,
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discharge_to_concept_id INT64 null ,
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preceding_visit_detail_id INT64 null ,
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visit_source_value STRING null ,
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visit_source_concept_id INT64 null ,
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admitting_source_value STRING null ,
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discharge_to_source_value STRING null ,
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visit_detail_parent_id INT64 null ,
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visit_occurrence_id INT64 not null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table procedure_occurrence
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(
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procedure_occurrence_id INT64 not null ,
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person_id INT64 not null ,
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procedure_concept_id INT64 not null ,
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procedure_DATE DATE not null ,
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procedure_DATETIME DATETIME null ,
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procedure_type_concept_id INT64 not null ,
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modifier_concept_id INT64 null ,
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quantity INT64 null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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procedure_source_value STRING null ,
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procedure_source_concept_id INT64 null ,
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modifier_source_value STRING null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table drug_exposure
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(
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drug_exposure_id INT64 not null ,
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person_id INT64 not null ,
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drug_concept_id INT64 not null ,
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drug_exposure_start_DATE DATE not null ,
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drug_exposure_start_DATETIME DATETIME null ,
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drug_exposure_end_DATE DATE not null ,
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drug_exposure_end_DATETIME DATETIME null ,
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verbatim_end_DATE DATE null ,
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drug_type_concept_id INT64 not null ,
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stop_reason STRING null ,
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refills INT64 null ,
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quantity FLOAT64 null ,
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days_supply INT64 null ,
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sig STRING null ,
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route_concept_id INT64 null ,
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lot_number STRING null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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drug_source_value STRING null ,
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drug_source_concept_id INT64 null ,
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route_source_value STRING null ,
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dose_unit_source_value STRING null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table device_exposure
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(
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device_exposure_id INT64 not null ,
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person_id INT64 not null ,
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device_concept_id INT64 not null ,
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device_exposure_start_DATE DATE not null ,
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device_exposure_start_DATETIME DATETIME null ,
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device_exposure_end_DATE DATE null ,
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device_exposure_end_DATETIME DATETIME null ,
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device_type_concept_id INT64 not null ,
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unique_device_id STRING null ,
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quantity INT64 null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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device_source_value STRING null ,
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device_source_concept_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table condition_occurrence
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(
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condition_occurrence_id INT64 not null ,
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person_id INT64 not null ,
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condition_concept_id INT64 not null ,
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condition_start_DATE DATE not null ,
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condition_start_DATETIME DATETIME null ,
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condition_end_DATE DATE null ,
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condition_end_DATETIME DATETIME null ,
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condition_type_concept_id INT64 not null ,
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stop_reason STRING null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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condition_source_value STRING null ,
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condition_source_concept_id INT64 null ,
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condition_status_source_value STRING null ,
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condition_status_concept_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table measurement
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(
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measurement_id INT64 not null ,
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person_id INT64 not null ,
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measurement_concept_id INT64 not null ,
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measurement_DATE DATE not null ,
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measurement_DATETIME DATETIME null ,
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measurement_time STRING null ,
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measurement_type_concept_id INT64 not null ,
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operator_concept_id INT64 null ,
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value_as_number FLOAT64 null ,
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value_as_concept_id INT64 null ,
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unit_concept_id INT64 null ,
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range_low FLOAT64 null ,
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range_high FLOAT64 null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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measurement_source_value STRING null ,
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measurement_source_concept_id INT64 null ,
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unit_source_value STRING null ,
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value_source_value STRING null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table note
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(
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note_id INT64 not null ,
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person_id INT64 not null ,
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note_DATE DATE not null ,
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note_DATETIME DATETIME null ,
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note_type_concept_id INT64 not null ,
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note_class_concept_id INT64 not null ,
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note_title STRING null ,
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note_text STRING null ,
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encoding_concept_id INT64 not null ,
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language_concept_id INT64 not null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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note_source_value STRING null
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)
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;
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create table note_nlp
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(
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note_nlp_id INT64 not null ,
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note_id INT64 not null ,
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section_concept_id INT64 null ,
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snippet STRING null ,
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"offset" STRING null ,
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lexical_variant STRING not null ,
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note_nlp_concept_id INT64 null ,
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note_nlp_source_concept_id INT64 null ,
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nlp_system STRING null ,
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nlp_DATE DATE not null ,
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nlp_DATETIME DATETIME null ,
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term_exists STRING null ,
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term_temporal STRING null ,
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term_modifiers STRING null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table observation
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(
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observation_id INT64 not null ,
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person_id INT64 not null ,
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observation_concept_id INT64 not null ,
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observation_DATE DATE not null ,
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observation_DATETIME DATETIME null ,
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observation_type_concept_id INT64 not null ,
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value_as_number FLOAT64 null ,
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value_as_string STRING null ,
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value_as_concept_id INT64 null ,
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qualifier_concept_id INT64 null ,
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unit_concept_id INT64 null ,
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provider_id INT64 null ,
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visit_occurrence_id INT64 null ,
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visit_detail_id INT64 null ,
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observation_source_value STRING null ,
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observation_source_concept_id INT64 null ,
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unit_source_value STRING null ,
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qualifier_source_value STRING null
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)
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;
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create table fact_relationship
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(
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domain_concept_id_1 INT64 not null ,
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fact_id_1 INT64 not null ,
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domain_concept_id_2 INT64 not null ,
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fact_id_2 INT64 not null ,
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relationship_concept_id INT64 not null
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)
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;
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create table location
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(
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location_id INT64 not null ,
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address_1 STRING null ,
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address_2 STRING null ,
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city STRING null ,
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state STRING null ,
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zip STRING null ,
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county STRING null ,
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location_source_value STRING null
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)
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;
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create table care_site
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(
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care_site_id INT64 not null ,
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care_site_name STRING null ,
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place_of_service_concept_id INT64 null ,
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location_id INT64 null ,
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care_site_source_value STRING null ,
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place_of_service_source_value STRING null
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)
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;
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create table provider
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(
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provider_id INT64 not null ,
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provider_name STRING null ,
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npi STRING null ,
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dea STRING null ,
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specialty_concept_id INT64 null ,
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care_site_id INT64 null ,
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year_of_birth INT64 null ,
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gender_concept_id INT64 null ,
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provider_source_value STRING null ,
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specialty_source_value STRING null ,
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specialty_source_concept_id INT64 null ,
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gender_source_value STRING null ,
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gender_source_concept_id INT64 null
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)
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;
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--HINT DISTRIBUTE_ON_KEY(person_id)
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create table payer_plan_period
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(
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payer_plan_period_id INT64 not null ,
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person_id INT64 not null ,
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payer_plan_period_start_DATE DATE not null ,
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payer_plan_period_end_DATE DATE not null ,
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payer_concept_id INT64 null ,
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payer_source_value STRING null ,
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payer_source_concept_id INT64 null ,
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plan_concept_id INT64 null ,
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plan_source_value STRING null ,
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plan_source_concept_id INT64 null ,
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sponsor_concept_id INT64 null ,
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sponsor_source_value STRING null ,
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sponsor_source_concept_id INT64 null ,
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family_source_value STRING null ,
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stop_reason_concept_id INT64 null ,
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stop_reason_source_value STRING null ,
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|
stop_reason_source_concept_id INT64 null
|
|
)
|
|
;
|
|
|
|
|
|
create table cost
|
|
(
|
|
cost_id INT64 not null ,
|
|
cost_event_id INT64 not null ,
|
|
cost_domain_id STRING not null ,
|
|
cost_type_concept_id INT64 not null ,
|
|
currency_concept_id INT64 null ,
|
|
total_charge FLOAT64 null ,
|
|
total_cost FLOAT64 null ,
|
|
total_paid FLOAT64 null ,
|
|
paid_by_payer FLOAT64 null ,
|
|
paid_by_patient FLOAT64 null ,
|
|
paid_patient_copay FLOAT64 null ,
|
|
paid_patient_coinsurance FLOAT64 null ,
|
|
paid_patient_deductible FLOAT64 null ,
|
|
paid_by_primary FLOAT64 null ,
|
|
paid_ingredient_cost FLOAT64 null ,
|
|
paid_dispensing_fee FLOAT64 null ,
|
|
payer_plan_period_id INT64 null ,
|
|
amount_allowed FLOAT64 null ,
|
|
revenue_code_concept_id INT64 null ,
|
|
revenue_code_source_value STRING null,
|
|
drg_concept_id INT64 null,
|
|
drg_source_value STRING null
|
|
)
|
|
;
|
|
|
|
|
|
--HINT DISTRIBUTE_ON_KEY(subject_id)
|
|
create table cohort
|
|
(
|
|
cohort_definition_id INT64 not null ,
|
|
subject_id INT64 not null ,
|
|
cohort_start_DATE DATE not null ,
|
|
cohort_end_DATE DATE not null
|
|
)
|
|
;
|
|
|
|
|
|
--HINT DISTRIBUTE_ON_KEY(subject_id)
|
|
create table cohort_attribute
|
|
(
|
|
cohort_definition_id INT64 not null ,
|
|
subject_id INT64 not null ,
|
|
cohort_start_DATE DATE not null ,
|
|
cohort_end_DATE DATE not null ,
|
|
attribute_definition_id INT64 not null ,
|
|
value_as_number FLOAT64 null ,
|
|
value_as_concept_id INT64 null
|
|
)
|
|
;
|
|
|
|
|
|
--HINT DISTRIBUTE_ON_KEY(person_id)
|
|
create table drug_era
|
|
(
|
|
drug_era_id INT64 not null ,
|
|
person_id INT64 not null ,
|
|
drug_concept_id INT64 not null ,
|
|
drug_era_start_DATE DATE not null ,
|
|
drug_era_end_DATE DATE not null ,
|
|
drug_exposure_count INT64 null ,
|
|
gap_days INT64 null
|
|
)
|
|
;
|
|
|
|
|
|
--HINT DISTRIBUTE_ON_KEY(person_id)
|
|
create table dose_era
|
|
(
|
|
dose_era_id INT64 not null ,
|
|
person_id INT64 not null ,
|
|
drug_concept_id INT64 not null ,
|
|
unit_concept_id INT64 not null ,
|
|
dose_value FLOAT64 not null ,
|
|
dose_era_start_DATE DATE not null ,
|
|
dose_era_end_DATE DATE not null
|
|
)
|
|
;
|
|
|
|
|
|
--HINT DISTRIBUTE_ON_KEY(person_id)
|
|
create table condition_era
|
|
(
|
|
condition_era_id INT64 not null ,
|
|
person_id INT64 not null ,
|
|
condition_concept_id INT64 not null ,
|
|
condition_era_start_DATE DATE not null ,
|
|
condition_era_end_DATE DATE not null ,
|
|
condition_occurrence_count INT64 null
|
|
)
|
|
;
|