diff --git a/bundle/phases/initialize.go b/bundle/phases/initialize.go
index aab8ccea..d8d03a32 100644
--- a/bundle/phases/initialize.go
+++ b/bundle/phases/initialize.go
@@ -55,6 +55,7 @@ func Initialize() bundle.Mutator {
 				"workspace",
 				"variables",
 			),
+			// Provide permission config errors & warnings after initializing all variables
 			permissions.PermissionDiagnostics(),
 			mutator.SetRunAs(),
 			mutator.OverrideCompute(),