mz-health/OMOP
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OMOP
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639 Commits

Author SHA1 Message Date
Yaroslav Halchenko dceb3a182b [DATALAD RUNCMD] run codespell throughout fixing typos automagically 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "codespell -w",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
 2024-03-28 15:31:24 -04:00
Yaroslav Halchenko 0c031eee12 [DATALAD RUNCMD] Fix fieds typo 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "git-sedi fieds fields",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
 2024-03-28 15:31:21 -04:00
Yaroslav Halchenko df61fe512c ignore embeded binary base64 blobs 2024-03-28 15:31:05 -04:00
Yaroslav Halchenko 53ab6acd2d various ignores including all short words - assuming they are all "legit" 2024-03-28 15:29:20 -04:00
Yaroslav Halchenko 320cc7a871 Add rudimentary codespell config 2024-03-28 15:29:20 -04:00
Yaroslav Halchenko 91d24515f0 Add github action to codespell main on push and PRs 2024-03-28 15:29:20 -04:00
Clair Blacketer 8b74e16ce0 closes #546 2024-03-28 15:28:11 -04:00
Clair Blacketer 8ed7a3908e closes #550 2024-03-28 15:25:28 -04:00
Clair Blacketer 56e1d1a59f Fixes to tooling support 2024-03-28 15:17:54 -04:00
Clair Blacketer c1c8e6a4f0 Full website, ddl, indices, and primary key updates 2024-03-28 15:09:22 -04:00
Clair Blacketer 22fe755ae0 Fixing typos 2024-03-28 14:37:46 -04:00
Clair Blacketer f774a0743b Merge branch 'main' of https://github.com/OHDSI/CommonDataModel 2024-03-28 14:35:59 -04:00
clairblacketer 119db6b2ea
Merge pull request #552 from OHDSI/doc-tooling-support 
Tooling support page
 2024-03-28 14:34:36 -04:00
clairblacketer d38086c36b
Merge branch 'main' into doc-tooling-support 2024-03-28 14:34:05 -04:00
Clair Blacketer 2346c49c0d closes #589, #554 2024-03-28 14:08:07 -04:00
Clair Blacketer 0d92edf5f7 closes #596 2024-03-28 13:43:37 -04:00
Clair Blacketer 4145f5bd97 closes #625 2024-03-28 13:41:01 -04:00
Clair Blacketer f1d1c3a23d closes #604 2024-03-28 13:39:03 -04:00
Clair Blacketer 00bd05daac closes #611 2024-03-28 13:32:44 -04:00
Clair Blacketer 47eced44c9 closes #617 2024-03-28 13:26:52 -04:00
Clair Blacketer 6333928fe0 Closes #587 2024-03-28 13:16:30 -04:00
Clair Blacketer 03ce1d5260 Closes OHDSI/Themis 77 2024-03-28 13:09:11 -04:00
Clair Blacketer 4e90a3529e closes #595 2024-03-28 12:54:26 -04:00
Clair Blacketer d9dfaff735 Merge branch 'main' of https://github.com/OHDSI/CommonDataModel 2024-03-28 12:44:12 -04:00
clairblacketer fd20424faa
Merge pull request #593 from OHDSI/docs_days_supply 
Update days_supply description and convention
 2024-03-28 12:40:57 -04:00
Clair Blacketer 7be2cd2a84 closes #599 2024-03-28 12:38:20 -04:00
Clair Blacketer 95fef98c90 Closes #603 2024-03-28 12:34:04 -04:00
Clair Blacketer 43f65730af Adding back docs for v6 2024-02-13 08:28:27 -05:00
Clair Blacketer 2188e7e014 Adding documentation back 2024-02-13 08:26:11 -05:00
clairblacketer 54adbf4837
Merge pull request #615 from OHDSI/cran-submission 
Cran submission
 2024-02-12 15:47:11 -05:00
Clair Blacketer 67e30a1d10 Added return values to all functions 2024-02-06 15:13:45 -05:00
Clair Blacketer d152472484 Single quotes around package name 2024-02-03 13:51:01 -05:00
Clair Blacketer b9e2be6188 Additional CRAN comments 2024-02-02 16:45:04 -05:00
Clair Blacketer 96c1711507 Addressing notes in CRAN submission 2024-02-02 13:54:24 -05:00
Clair Blacketer fac08dfbee Final edits for cran submission 
This commit adds comments for the cran submission and schedules github actions to run once a week.
 2024-02-02 11:52:43 -05:00
Maxim Moinat 46e13a1a3c
update days supply convention to v5.3 and v6.0 2023-12-09 10:57:32 +01:00
Frank DeFalco 3874edd67b update for platform build differences 2023-10-26 14:27:35 -04:00
Frank DeFalco 1ac9880f40 updates to documentation and build status 2023-10-26 14:13:30 -04:00
Maxim Moinat 4a764dcca1
Update days_supply description and convention 2023-10-06 21:19:43 +02:00
clairblacketer 55c4d7a934
Merge pull request #583 from TheCedarPrince/patch-1 
Small docs PR for building new OMOP CDM Versions
 2023-09-15 11:48:30 -04:00
Frank DeFalco 788ae51059
Merge pull request #590 from OHDSI/supported-dialects-update 
updating for recent SqlRender supported dialects
 2023-09-08 13:38:03 -04:00
Frank DeFalco efced48cb4 incrementing cache and checkout actions 2023-09-07 16:16:54 -04:00
Frank DeFalco 9d73215f42 updating actions for tinytex and pandoc 2023-09-07 15:37:48 -04:00
Frank DeFalco 23e4db4b7e update github actions to setup-r@v2 2023-09-07 14:57:48 -04:00
Frank DeFalco 428420ec94 improve error handling on database connector jar setings. 2023-09-07 14:37:29 -04:00
Frank DeFalco 1bcb2236e8 resolved issues with CHECK and tests. 2023-09-07 13:52:20 -04:00
Frank DeFalco f39870c7d5 correct build of new files 
includes consistent case for table names
proper directory structure
 2023-09-06 13:22:41 -04:00
Frank DeFalco a029324c48 updating for recent SqlRender supported dialects 2023-08-23 12:28:00 -04:00
clairblacketer 8c18f01274
Merge pull request #526 from OHDSI/use-sqlrenderr-supported-dialects 
use the sqlrender function for supported dialects
 2023-07-21 12:02:53 -04:00
Jacob S. Zelko 71d79251b0
Small docs PR for building new OMOP CDM Versions 2023-07-18 08:41:23 -07:00