Adam Black
eb3d27926f
Add imports and update docs.
2021-08-19 16:22:08 -04:00
Adam Black
63ba979509
Merge in Maxims changes. update documentation
2021-08-19 16:00:24 -04:00
Maxim Moinat
b3fddfbb85
Function to Build Release Zips ( #429 )
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* buildRelease and buildReleaseZip
* add buildRelease
2021-08-19 15:43:34 -04:00
Adam Black
ed5fb2d428
Add tests for redshift. Clean up test setup file.
2021-08-19 15:17:01 -04:00
Alan Andryc
d73a0f426d
Merge branch 'v5.4' into v5.4
2021-08-19 13:30:50 -04:00
Andryc
7036b0e0f3
resolving merge issue on field level csv
2021-08-19 13:14:23 -04:00
Clair Blacketer
c9463d0cf1
Adding EPISODE and EPISODE event tables
2021-08-19 12:58:41 -04:00
Andryc
6414b42f6b
prepping for pull request
2021-08-19 12:46:40 -04:00
Clair Blacketer
a2812b85e5
Added EPISODE and EPISODE_EVENT tables to table_level_5.4
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Also update the oncology extension documents to align with the table level file for v5.4
2021-08-19 12:45:44 -04:00
Andryc
4be728e9d8
Updates to yml and cdm531.Rmd
2021-08-19 12:20:49 -04:00
Adam Black
19462d322d
Add tests, github actions, and executeDdl function ( #425 )
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* Add github actions workflow to build package and run tests.
* update Description file
* rename .Rproj file.
* Consolidate 'create' functions into one file.
* Add tests for create functions.
* update description
* removed spaces in file and folder names. Regenerated ddl output. Tried to fix Field_Level.csv file.
* consolidate write functions into one file. Add execute function.
* update docs
* add tests for write and execute functions
* update documentation
* Add windows and linux runners in github actions.
* update github actions
* download drivers before running tests
* fix small error in setup test file.
* debug github actions
* debug github actions
* debug github actions
* debug github actions
* fix tiny bug
* comment out execute ddl test
* fix bug in test
* Add execute test back in
* revert accidental change in description
* add print statement for debugging schema error on github actions.
* Fix schema environment variable name
* Add comment to github actions workflow file.
* remove placeholder text in function documentation.
* Rename createdDdl.R to createDdl.R
Co-authored-by: Adam Black <adam.black@odysseusinc.com>
2021-08-19 11:49:36 -04:00
Adam Black
05e9b801e0
Rename createdDdl.R to createDdl.R
2021-08-19 11:47:56 -04:00
Adam Black
948a78c09f
remove placeholder text in function documentation.
2021-08-19 11:46:01 -04:00
Adam Black
35ce18ce81
Add comment to github actions workflow file.
2021-08-19 09:23:11 -04:00
Adam Black
618f35fe02
Fix schema environment variable name
2021-08-19 09:13:04 -04:00
Adam Black
66a892d87c
add print statement for debugging schema error on github actions.
2021-08-19 09:11:02 -04:00
Adam Black
fb950dedf8
revert accidental change in description
2021-08-19 08:58:34 -04:00
Adam Black
c2717409d3
Add execute test back in
2021-08-19 08:33:24 -04:00
Adam Black
cea09cf273
fix bug in test
2021-08-19 08:23:41 -04:00
Adam Black
7ecd0a5410
comment out execute ddl test
2021-08-19 08:13:03 -04:00
Adam Black
c85759800e
fix tiny bug
2021-08-19 07:47:49 -04:00
Adam Black
bce8bc5edc
debug github actions
2021-08-19 07:45:18 -04:00
Adam Black
639d6a9d0a
debug github actions
2021-08-19 07:35:41 -04:00
Adam Black
7a59d0350f
debug github actions
2021-08-19 00:25:02 -04:00
Adam Black
b54b1947dd
debug github actions
2021-08-19 00:18:54 -04:00
Adam Black
3b2c6b5757
fix small error in setup test file.
2021-08-19 00:12:04 -04:00
Adam Black
d17830759e
download drivers before running tests
2021-08-19 00:04:51 -04:00
Adam Black
a6366dff4a
update github actions
2021-08-18 23:50:22 -04:00
Adam Black
33919b85cf
Add windows and linux runners in github actions.
2021-08-18 23:48:34 -04:00
Adam Black
70798bb1b6
update documentation
2021-08-18 23:36:11 -04:00
Adam Black
ae921ede24
add tests for write and execute functions
2021-08-18 23:35:38 -04:00
Adam Black
e6a2940474
update docs
2021-08-18 23:34:48 -04:00
Adam Black
08bf6ee17e
consolidate write functions into one file. Add execute function.
2021-08-18 23:32:31 -04:00
Adam Black
867e9bb559
removed spaces in file and folder names. Regenerated ddl output. Tried to fix Field_Level.csv file.
2021-08-18 23:28:57 -04:00
Adam Black
887e882572
update description
2021-08-18 23:27:01 -04:00
Adam Black
f92a21cd64
Add tests for create functions.
2021-08-18 17:20:59 -04:00
Adam Black
02260fb855
Consolidate 'create' functions into one file.
2021-08-18 17:20:34 -04:00
Adam Black
9508b28c51
rename .Rproj file.
2021-08-18 17:19:56 -04:00
Adam Black
cccdaef586
update Description file
2021-08-18 17:19:34 -04:00
Adam Black
f603929f8b
Add github actions workflow to build package and run tests.
2021-08-18 17:19:20 -04:00
Frank DeFalco
27522b0896
Merge pull request #423 from OHDSI/v5.4_cleanup
...
various
2021-08-18 16:07:09 -04:00
Frank DeFalco
918b57bcca
Merge branch 'v5.4' into v5.4_cleanup
2021-08-18 16:06:08 -04:00
Frank DeFalco
a4bfeccf83
function naming & additional cleanup
...
made create and write functions consistent
fixed render issue that was not including dialect name in generated files
added loop to codeToRun to generate all scripts.
2021-08-18 15:30:04 -04:00
clairblacketer
5dd9850088
Merge pull request #414 from NACHC-CAD/v5.4
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Issue #259 [measurement table] added unit_source_concept_id
2021-08-18 15:05:21 -04:00
clairblacketer
ea0fc0f80b
Merge branch 'v5.4' into v5.4
2021-08-18 15:05:14 -04:00
clairblacketer
577cad1cc5
Merge pull request #413 from aandryc/v5.4
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Added CDM v5.4 menu item
2021-08-18 14:56:29 -04:00
clairblacketer
915d7595bb
Merge branch 'v5.4' into v5.4
2021-08-18 14:56:07 -04:00
unknown
b4661f637d
Issue #149 saved fix for nullables in vocabulary table (vocabulary_reference and vocabulary_version both have isRequired=No)
2021-08-18 14:37:43 -04:00
Frank DeFalco
be7ea44fba
various
...
fixed writePrimary use of fk function
removed old/unnecessary files - reviewed with CB
added listSupportedVersions function - explicitly not including 6.0
2021-08-18 14:24:45 -04:00
unknown
543893d406
Issue #149 fix for nullables in vocabulary table (vocabulary_reference isRequired=Yes vocabulary_version isRequired=No)
2021-08-18 14:23:54 -04:00